Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 YBX1P10-201ENST00000444752 975 ntBASIC17.26■□□□□ 0.35
HINT3Q9NQE9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 TSPY20P-201ENST00000450910 630 ntBASIC17.26■□□□□ 0.35
HINT3Q9NQE9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 AP006587.1-201ENST00000534129 1502 ntBASIC17.26■□□□□ 0.35
HINT3Q9NQE9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HINT3Q9NQE9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 AC092368.3-202ENST00000574180 1591 ntBASIC17.25■□□□□ 0.35
HINT3Q9NQE9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 MIR4651-201ENST00000582622 73 ntBASIC17.25■□□□□ 0.35
HINT3Q9NQE9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.25■□□□□ 0.35
HINT3Q9NQE9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 AL390961.4-201ENST00000623958 2535 ntBASIC17.25■□□□□ 0.35
HINT3Q9NQE9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HINT3Q9NQE9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 UNC93B5-201ENST00000530315 699 ntBASIC17.24■□□□□ 0.35
HINT3Q9NQE9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HINT3Q9NQE9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms