Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
CDT1Q9H211 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDT1Q9H211 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDT1Q9H211 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDT1Q9H211 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDT1Q9H211 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.71■□□□□ 0.91
CDT1Q9H211 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.71■□□□□ 0.91
CDT1Q9H211 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.71■□□□□ 0.91
CDT1Q9H211 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDT1Q9H211 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.7■□□□□ 0.91
CDT1Q9H211 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
CDT1Q9H211 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDT1Q9H211 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.7■□□□□ 0.9
CDT1Q9H211 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDT1Q9H211 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDT1Q9H211 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDT1Q9H211 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDT1Q9H211 AC141586.3-201ENST00000562166 1838 ntBASIC20.7■□□□□ 0.9
CDT1Q9H211 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDT1Q9H211 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.7■□□□□ 0.9
CDT1Q9H211 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDT1Q9H211 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.7■□□□□ 0.9
CDT1Q9H211 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.7■□□□□ 0.9
CDT1Q9H211 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.7■□□□□ 0.9
CDT1Q9H211 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDT1Q9H211 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDT1Q9H211 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.7■□□□□ 0.9
CDT1Q9H211 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.7■□□□□ 0.9
CDT1Q9H211 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.7■□□□□ 0.9
CDT1Q9H211 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.7■□□□□ 0.9
CDT1Q9H211 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.7■□□□□ 0.9
CDT1Q9H211 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.7■□□□□ 0.9
CDT1Q9H211 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDT1Q9H211 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDT1Q9H211 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.7■□□□□ 0.9
CDT1Q9H211 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDT1Q9H211 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.7■□□□□ 0.9
CDT1Q9H211 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDT1Q9H211 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDT1Q9H211 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.7■□□□□ 0.9
CDT1Q9H211 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDT1Q9H211 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.69■□□□□ 0.9
CDT1Q9H211 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDT1Q9H211 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDT1Q9H211 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDT1Q9H211 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDT1Q9H211 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDT1Q9H211 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
CDT1Q9H211 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDT1Q9H211 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDT1Q9H211 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.69■□□□□ 0.9
CDT1Q9H211 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.69■□□□□ 0.9
CDT1Q9H211 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.69■□□□□ 0.9
CDT1Q9H211 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDT1Q9H211 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDT1Q9H211 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDT1Q9H211 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDT1Q9H211 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.69■□□□□ 0.9
CDT1Q9H211 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.69■□□□□ 0.9
CDT1Q9H211 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDT1Q9H211 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.69■□□□□ 0.9
CDT1Q9H211 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDT1Q9H211 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDT1Q9H211 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDT1Q9H211 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDT1Q9H211 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDT1Q9H211 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.68■□□□□ 0.9
CDT1Q9H211 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.68■□□□□ 0.9
CDT1Q9H211 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CDT1Q9H211 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.68■□□□□ 0.9
CDT1Q9H211 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDT1Q9H211 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CDT1Q9H211 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDT1Q9H211 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDT1Q9H211 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.68■□□□□ 0.9
CDT1Q9H211 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDT1Q9H211 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.68■□□□□ 0.9
CDT1Q9H211 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.68■□□□□ 0.9
CDT1Q9H211 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.68■□□□□ 0.9
CDT1Q9H211 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.68■□□□□ 0.9
CDT1Q9H211 MIR4674-201ENST00000582457 87 ntBASIC20.68■□□□□ 0.9
CDT1Q9H211 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.68■□□□□ 0.9
CDT1Q9H211 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDT1Q9H211 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.68■□□□□ 0.9
CDT1Q9H211 AC008622.2-201ENST00000617006 1229 ntBASIC20.68■□□□□ 0.9
CDT1Q9H211 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
CDT1Q9H211 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDT1Q9H211 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDT1Q9H211 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.68■□□□□ 0.9
CDT1Q9H211 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDT1Q9H211 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDT1Q9H211 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDT1Q9H211 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDT1Q9H211 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDT1Q9H211 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDT1Q9H211 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDT1Q9H211 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CDT1Q9H211 IRX1P1-201ENST00000438849 1838 ntBASIC20.67■□□□□ 0.9
CDT1Q9H211 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDT1Q9H211 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms