Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.76
RNF38Q9H0F5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.82■□□□□ 0.76
RNF38Q9H0F5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 TSPY21P-201ENST00000433481 731 ntBASIC19.82■□□□□ 0.76
RNF38Q9H0F5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 COX11P1-201ENST00000489116 835 ntBASIC19.82■□□□□ 0.76
RNF38Q9H0F5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF38Q9H0F5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 RNF152P1-201ENST00000397754 604 ntBASIC19.81■□□□□ 0.76
RNF38Q9H0F5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF38Q9H0F5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 TSPY5P-201ENST00000426936 936 ntBASIC19.8■□□□□ 0.76
RNF38Q9H0F5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 AC022616.7-201ENST00000525383 220 ntBASIC19.8■□□□□ 0.76
RNF38Q9H0F5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 AC008622.2-201ENST00000617006 1229 ntBASIC19.8■□□□□ 0.76
RNF38Q9H0F5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 AL158211.5-201ENST00000623583 2518 ntBASIC19.8■□□□□ 0.76
RNF38Q9H0F5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF38Q9H0F5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 AFG3L1P-217ENST00000557444 2447 ntBASIC19.79■□□□□ 0.76
RNF38Q9H0F5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 AL512604.3-201ENST00000569583 964 ntBASIC19.79■□□□□ 0.76
RNF38Q9H0F5 MIR4674-201ENST00000582457 87 ntBASIC19.79■□□□□ 0.76
RNF38Q9H0F5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms