Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-1Q9BYR8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-1Q9BYR8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 ADAM3B-201ENST00000569937 840 ntBASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 RN7SL121P-201ENST00000584223 273 ntBASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-1Q9BYR8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 AC073592.3-201ENST00000625118 1834 ntBASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 AC010740.1-201ENST00000417035 684 ntBASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 RPS2P52-201ENST00000469610 820 ntBASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 AL390728.6-201ENST00000566446 1246 ntBASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 AC005181.1-201ENST00000604782 1256 ntBASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 AC006557.6-201ENST00000623071 864 ntBASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 MARS-234ENST00000630571 216 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 MARS-235ENST00000630803 183 ntTSL 3 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-1Q9BYR8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms