Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 TSPY23P-201ENST00000440136 739 ntBASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 AC006058.3-201ENST00000606217 1069 ntBASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERPUD2Q9BSE4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 Z98044.1-201ENST00000632503 1764 ntBASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 KRT8P41-201ENST00000533985 1514 ntBASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HERPUD2Q9BSE4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.8■□□□□ 0.76
HERPUD2Q9BSE4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 PRORSD1P-201ENST00000295112 541 ntBASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 AL160286.2-201ENST00000567150 934 ntBASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERPUD2Q9BSE4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 AC128676.1-201ENST00000454392 318 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms