Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CMKLR1Q99788 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CMKLR1Q99788 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CMKLR1Q99788 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CMKLR1Q99788 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.28■□□□□ 0.52
CMKLR1Q99788 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CMKLR1Q99788 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CMKLR1Q99788 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CMKLR1Q99788 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.28■□□□□ 0.52
CMKLR1Q99788 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CMKLR1Q99788 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CMKLR1Q99788 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.28■□□□□ 0.52
CMKLR1Q99788 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.28■□□□□ 0.52
CMKLR1Q99788 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.28■□□□□ 0.52
CMKLR1Q99788 NEK4P2-201ENST00000580004 1012 ntBASIC18.28■□□□□ 0.52
CMKLR1Q99788 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.28■□□□□ 0.52
CMKLR1Q99788 AC073314.1-201ENST00000568729 2216 ntBASIC18.28■□□□□ 0.52
CMKLR1Q99788 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CMKLR1Q99788 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CMKLR1Q99788 GABARAPL3-202ENST00000624044 1851 ntBASIC18.28■□□□□ 0.52
CMKLR1Q99788 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.28■□□□□ 0.52
CMKLR1Q99788 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CMKLR1Q99788 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CMKLR1Q99788 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CMKLR1Q99788 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CMKLR1Q99788 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CMKLR1Q99788 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CMKLR1Q99788 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CMKLR1Q99788 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CMKLR1Q99788 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CMKLR1Q99788 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CMKLR1Q99788 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CMKLR1Q99788 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CMKLR1Q99788 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CMKLR1Q99788 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CMKLR1Q99788 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.27■□□□□ 0.52
CMKLR1Q99788 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.27■□□□□ 0.52
CMKLR1Q99788 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.27■□□□□ 0.52
CMKLR1Q99788 AP005212.1-201ENST00000581547 1997 ntBASIC18.27■□□□□ 0.52
CMKLR1Q99788 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CMKLR1Q99788 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CMKLR1Q99788 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CMKLR1Q99788 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.27■□□□□ 0.52
CMKLR1Q99788 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.27■□□□□ 0.51
CMKLR1Q99788 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.27■□□□□ 0.51
CMKLR1Q99788 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CMKLR1Q99788 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.27■□□□□ 0.51
CMKLR1Q99788 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CMKLR1Q99788 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CMKLR1Q99788 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CMKLR1Q99788 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.27■□□□□ 0.51
CMKLR1Q99788 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CMKLR1Q99788 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CMKLR1Q99788 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
CMKLR1Q99788 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CMKLR1Q99788 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CMKLR1Q99788 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CMKLR1Q99788 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CMKLR1Q99788 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CMKLR1Q99788 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CMKLR1Q99788 AL512408.1-201ENST00000569378 2000 ntBASIC18.26■□□□□ 0.51
CMKLR1Q99788 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CMKLR1Q99788 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CMKLR1Q99788 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CMKLR1Q99788 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CMKLR1Q99788 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CMKLR1Q99788 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.26■□□□□ 0.51
CMKLR1Q99788 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CMKLR1Q99788 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CMKLR1Q99788 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
CMKLR1Q99788 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
CMKLR1Q99788 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CMKLR1Q99788 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CMKLR1Q99788 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CMKLR1Q99788 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CMKLR1Q99788 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CMKLR1Q99788 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CMKLR1Q99788 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CMKLR1Q99788 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.25■□□□□ 0.51
CMKLR1Q99788 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.25■□□□□ 0.51
CMKLR1Q99788 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.25■□□□□ 0.51
CMKLR1Q99788 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CMKLR1Q99788 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms