Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
LITAFQ99732 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
LITAFQ99732 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.73□□□□□ -0.37
LITAFQ99732 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LITAFQ99732 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
LITAFQ99732 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LITAFQ99732 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
LITAFQ99732 AC019069.1-201ENST00000610008 1333 ntBASIC12.73□□□□□ -0.37
LITAFQ99732 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC12.73□□□□□ -0.37
LITAFQ99732 MTURN-203ENST00000409688 843 ntTSL 2 BASIC12.73□□□□□ -0.37
LITAFQ99732 GUSBP5-201ENST00000418136 578 ntBASIC12.73□□□□□ -0.37
LITAFQ99732 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 CASP6-205ENST00000505486 538 ntTSL 4 BASIC12.73□□□□□ -0.37
LITAFQ99732 AC131281.2-201ENST00000520478 145 ntBASIC12.73□□□□□ -0.37
LITAFQ99732 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC12.73□□□□□ -0.37
LITAFQ99732 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC12.73□□□□□ -0.37
LITAFQ99732 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC12.73□□□□□ -0.37
LITAFQ99732 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LITAFQ99732 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.73□□□□□ -0.37
LITAFQ99732 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LITAFQ99732 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LITAFQ99732 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LITAFQ99732 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LITAFQ99732 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC12.73□□□□□ -0.37
LITAFQ99732 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LITAFQ99732 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC12.72□□□□□ -0.37
LITAFQ99732 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LITAFQ99732 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LITAFQ99732 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
LITAFQ99732 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LITAFQ99732 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.72□□□□□ -0.37
LITAFQ99732 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.72□□□□□ -0.37
LITAFQ99732 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LITAFQ99732 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LITAFQ99732 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LITAFQ99732 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LITAFQ99732 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC12.72□□□□□ -0.37
LITAFQ99732 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.72□□□□□ -0.37
LITAFQ99732 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC12.72□□□□□ -0.37
LITAFQ99732 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC12.72□□□□□ -0.37
LITAFQ99732 AL354811.1-201ENST00000610286 706 ntBASIC12.72□□□□□ -0.37
LITAFQ99732 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LITAFQ99732 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC12.72□□□□□ -0.37
LITAFQ99732 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.72□□□□□ -0.37
LITAFQ99732 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
LITAFQ99732 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms