Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 AC008403.3-201ENST00000598924 454 ntBASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST1H2AAQ96QV6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AAQ96QV6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 ESRRAP1-201ENST00000400596 1257 ntBASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.55■□□□□ 0.24
HIST1H2AAQ96QV6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms