Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC087623.3-201ENST00000607047 1098 ntBASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 AC019069.1-201ENST00000610008 1333 ntBASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHMP6Q96FZ7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 AC008764.6-201ENST00000595909 2069 ntBASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP6Q96FZ7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 UBE2DNL-204ENST00000602536 740 ntBASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 CYP21A1P-202ENST00000354927 1481 ntBASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CHMP6Q96FZ7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 MIR6821-201ENST00000617625 74 ntBASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP6Q96FZ7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 ZNF815P-204ENST00000434898 1737 ntBASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 ANO7L1-203ENST00000602586 1720 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms