Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 HLA-G-202ENST00000376815 851 ntBASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 HLA-G-203ENST00000376818 1127 ntBASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC197Q8NCU1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 AC134043.2-201ENST00000624206 2238 ntBASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC197Q8NCU1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 AC099791.1-201ENST00000416440 715 ntBASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 CYP21A1P-202ENST00000354927 1481 ntBASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC197Q8NCU1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 PCDHA12-202ENST00000613593 2588 ntBASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 AC124067.4-201ENST00000519691 2379 ntBASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC197Q8NCU1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms