Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 AL138781.2-201ENST00000617896 1843 ntBASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDKL3Q8IVW4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 AC124016.1-201ENST00000609552 612 ntBASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDKL3Q8IVW4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 AC133681.1-201ENST00000465482 601 ntBASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 RN7SL471P-201ENST00000580476 299 ntBASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDKL3Q8IVW4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 TSPY23P-201ENST00000440136 739 ntBASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 AC006058.3-201ENST00000606217 1069 ntBASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 AC110285.5-201ENST00000611501 352 ntBASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 AC073648.6-201ENST00000641589 218 ntBASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDKL3Q8IVW4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms