Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 HTR7P1-202ENST00000624664 4411 ntBASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUDCD3Q8IVD9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 AC006015.1-201ENST00000429970 570 ntBASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.98■□□□□ 0.63
NUDCD3Q8IVD9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 KRT18P5-201ENST00000436075 1291 ntBASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.97■□□□□ 0.63
NUDCD3Q8IVD9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 AC087623.3-201ENST00000607047 1098 ntBASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 FEM1AP3-201ENST00000403722 1741 ntBASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 NOC2LP1-202ENST00000452600 2235 ntBASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD3Q8IVD9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NUDCD3Q8IVD9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms