Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF1Q5TC12 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF1Q5TC12 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 PHGDH-210ENST00000641115 1638 ntBASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 ESRRAP1-201ENST00000400596 1257 ntBASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 AL121829.2-201ENST00000620908 328 ntBASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 AL390961.4-201ENST00000623958 2535 ntBASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.56■□□□□ 0.24
ATPAF1Q5TC12 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 KRT17P3-201ENST00000420566 1262 ntBASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms