Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 C1QBPP2-201ENST00000528754 825 ntBASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 NEFHP1-201ENST00000412845 2629 ntBASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP13A4Q4VNC1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 AL138781.2-201ENST00000617896 1843 ntBASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP13A4Q4VNC1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 AC104581.1-202ENST00000635932 2618 ntBASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 TSPY23P-201ENST00000440136 739 ntBASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP13A4Q4VNC1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATP13A4Q4VNC1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATP13A4Q4VNC1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATP13A4Q4VNC1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATP13A4Q4VNC1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP13A4Q4VNC1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.89■□□□□ 0.77
ATP13A4Q4VNC1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP13A4Q4VNC1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.89■□□□□ 0.77
ATP13A4Q4VNC1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.89■□□□□ 0.77
ATP13A4Q4VNC1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms