Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H1AQ02539 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 TSPY6P-201ENST00000448518 926 ntBASIC14.61□□□□□ -0.07
HIST1H1AQ02539 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H1AQ02539 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 AC092368.3-202ENST00000574180 1591 ntBASIC14.6□□□□□ -0.07
HIST1H1AQ02539 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 AC073210.2-201ENST00000430369 194 ntBASIC14.6□□□□□ -0.07
HIST1H1AQ02539 NCF1B-203ENST00000435988 1254 ntBASIC14.6□□□□□ -0.07
HIST1H1AQ02539 AC097658.1-201ENST00000475555 843 ntBASIC14.6□□□□□ -0.07
HIST1H1AQ02539 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H1AQ02539 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 AC124283.5-201ENST00000624661 1809 ntBASIC14.59□□□□□ -0.07
HIST1H1AQ02539 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.59□□□□□ -0.07
HIST1H1AQ02539 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 RPS2P52-201ENST00000469610 820 ntBASIC14.59□□□□□ -0.07
HIST1H1AQ02539 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
HIST1H1AQ02539 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms