Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA4P43681 RCC2P6-201ENST00000526625 1557 ntBASIC19.29■□□□□ 0.68
CHRNA4P43681 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRNA4P43681 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA4P43681 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA4P43681 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.29■□□□□ 0.68
CHRNA4P43681 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CHRNA4P43681 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA4P43681 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CHRNA4P43681 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.29■□□□□ 0.68
CHRNA4P43681 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA4P43681 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRNA4P43681 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.29■□□□□ 0.68
CHRNA4P43681 CD177P1-201ENST00000606252 935 ntBASIC19.29■□□□□ 0.68
CHRNA4P43681 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRNA4P43681 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.29■□□□□ 0.68
CHRNA4P43681 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.29■□□□□ 0.68
CHRNA4P43681 AC004408.2-201ENST00000623613 2777 ntBASIC19.29■□□□□ 0.68
CHRNA4P43681 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA4P43681 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA4P43681 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA4P43681 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA4P43681 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA4P43681 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA4P43681 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CHRNA4P43681 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA4P43681 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA4P43681 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CHRNA4P43681 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.28■□□□□ 0.68
CHRNA4P43681 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.28■□□□□ 0.68
CHRNA4P43681 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA4P43681 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CHRNA4P43681 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA4P43681 AC008040.2-201ENST00000461049 708 ntBASIC19.28■□□□□ 0.68
CHRNA4P43681 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA4P43681 AC091390.4-202ENST00000476426 537 ntBASIC19.28■□□□□ 0.68
CHRNA4P43681 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA4P43681 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.28■□□□□ 0.68
CHRNA4P43681 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA4P43681 AC113410.3-201ENST00000623366 203 ntBASIC19.28■□□□□ 0.68
CHRNA4P43681 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA4P43681 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA4P43681 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA4P43681 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA4P43681 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CHRNA4P43681 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA4P43681 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA4P43681 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA4P43681 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CHRNA4P43681 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.28■□□□□ 0.68
CHRNA4P43681 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 AL135905.2-201ENST00000584934 1404 ntBASIC19.27■□□□□ 0.68
CHRNA4P43681 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.27■□□□□ 0.68
CHRNA4P43681 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CHRNA4P43681 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.27■□□□□ 0.68
CHRNA4P43681 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 AC011506.1-201ENST00000474329 610 ntBASIC19.27■□□□□ 0.68
CHRNA4P43681 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.27■□□□□ 0.68
CHRNA4P43681 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CHRNA4P43681 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CHRNA4P43681 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CHRNA4P43681 AC233702.5-201ENST00000584107 538 ntBASIC19.27■□□□□ 0.68
CHRNA4P43681 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.27■□□□□ 0.68
CHRNA4P43681 AL031985.4-201ENST00000642138 673 ntBASIC19.27■□□□□ 0.68
CHRNA4P43681 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 FEM1AP3-201ENST00000403722 1741 ntBASIC19.27■□□□□ 0.68
CHRNA4P43681 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.27■□□□□ 0.68
CHRNA4P43681 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA4P43681 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNA4P43681 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.27■□□□□ 0.67
CHRNA4P43681 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNA4P43681 AIRN-201ENST00000601203 4374 ntBASIC19.27■□□□□ 0.67
CHRNA4P43681 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CHRNA4P43681 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNA4P43681 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNA4P43681 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHRNA4P43681 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA4P43681 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA4P43681 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA4P43681 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.26■□□□□ 0.67
CHRNA4P43681 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA4P43681 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CHRNA4P43681 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.26■□□□□ 0.67
CHRNA4P43681 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.26■□□□□ 0.67
CHRNA4P43681 AC012618.2-201ENST00000428058 849 ntBASIC19.26■□□□□ 0.67
CHRNA4P43681 TSPY21P-201ENST00000433481 731 ntBASIC19.26■□□□□ 0.67
CHRNA4P43681 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms