Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIA1P42261 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
GRIA1P42261 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIA1P42261 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIA1P42261 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIA1P42261 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIA1P42261 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIA1P42261 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIA1P42261 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIA1P42261 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.38■□□□□ 0.69
GRIA1P42261 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.38■□□□□ 0.69
GRIA1P42261 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.38■□□□□ 0.69
GRIA1P42261 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.38■□□□□ 0.69
GRIA1P42261 RN7SL471P-201ENST00000580476 299 ntBASIC19.38■□□□□ 0.69
GRIA1P42261 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.38■□□□□ 0.69
GRIA1P42261 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIA1P42261 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
GRIA1P42261 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.38■□□□□ 0.69
GRIA1P42261 AC006058.3-201ENST00000606217 1069 ntBASIC19.38■□□□□ 0.69
GRIA1P42261 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.38■□□□□ 0.69
GRIA1P42261 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GRIA1P42261 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GRIA1P42261 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.37■□□□□ 0.69
GRIA1P42261 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
GRIA1P42261 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.37■□□□□ 0.69
GRIA1P42261 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.37■□□□□ 0.69
GRIA1P42261 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.37■□□□□ 0.69
GRIA1P42261 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
GRIA1P42261 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.37■□□□□ 0.69
GRIA1P42261 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.37■□□□□ 0.69
GRIA1P42261 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.37■□□□□ 0.69
GRIA1P42261 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.37■□□□□ 0.69
GRIA1P42261 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.37■□□□□ 0.69
GRIA1P42261 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
GRIA1P42261 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GRIA1P42261 AL031598.1-201ENST00000561511 1773 ntBASIC19.37■□□□□ 0.69
GRIA1P42261 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 KRT8P41-201ENST00000533985 1514 ntBASIC19.36■□□□□ 0.69
GRIA1P42261 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.36■□□□□ 0.69
GRIA1P42261 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GRIA1P42261 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
GRIA1P42261 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.36■□□□□ 0.69
GRIA1P42261 TSPY23P-201ENST00000440136 739 ntBASIC19.36■□□□□ 0.69
GRIA1P42261 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
GRIA1P42261 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.36■□□□□ 0.69
GRIA1P42261 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
GRIA1P42261 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GRIA1P42261 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GRIA1P42261 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.35■□□□□ 0.69
GRIA1P42261 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.35■□□□□ 0.69
GRIA1P42261 KRT16P5-201ENST00000455284 522 ntBASIC19.35■□□□□ 0.69
GRIA1P42261 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.35■□□□□ 0.69
GRIA1P42261 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.35■□□□□ 0.69
GRIA1P42261 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.35■□□□□ 0.69
GRIA1P42261 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.35■□□□□ 0.69
GRIA1P42261 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.35■□□□□ 0.69
GRIA1P42261 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.35■□□□□ 0.69
GRIA1P42261 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GRIA1P42261 AL512353.2-201ENST00000448759 1962 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms