Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCKBRP32239 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCKBRP32239 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.36■□□□□ 0.53
CCKBRP32239 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCKBRP32239 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCKBRP32239 KRT8P45-201ENST00000414328 1447 ntBASIC18.36■□□□□ 0.53
CCKBRP32239 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.36■□□□□ 0.53
CCKBRP32239 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.36■□□□□ 0.53
CCKBRP32239 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.36■□□□□ 0.53
CCKBRP32239 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.36■□□□□ 0.53
CCKBRP32239 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.36■□□□□ 0.53
CCKBRP32239 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CCKBRP32239 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.36■□□□□ 0.53
CCKBRP32239 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.36■□□□□ 0.53
CCKBRP32239 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.36■□□□□ 0.53
CCKBRP32239 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.36■□□□□ 0.53
CCKBRP32239 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.36■□□□□ 0.53
CCKBRP32239 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCKBRP32239 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.35■□□□□ 0.53
CCKBRP32239 GABARAPL3-202ENST00000624044 1851 ntBASIC18.35■□□□□ 0.53
CCKBRP32239 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCKBRP32239 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.35■□□□□ 0.53
CCKBRP32239 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCKBRP32239 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 KRT8P11-201ENST00000409686 1436 ntBASIC18.35■□□□□ 0.53
CCKBRP32239 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.35■□□□□ 0.53
CCKBRP32239 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.35■□□□□ 0.53
CCKBRP32239 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.35■□□□□ 0.53
CCKBRP32239 NEK4P2-201ENST00000580004 1012 ntBASIC18.35■□□□□ 0.53
CCKBRP32239 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCKBRP32239 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCKBRP32239 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCKBRP32239 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCKBRP32239 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCKBRP32239 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCKBRP32239 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCKBRP32239 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCKBRP32239 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCKBRP32239 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCKBRP32239 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.34■□□□□ 0.53
CCKBRP32239 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCKBRP32239 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCKBRP32239 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.34■□□□□ 0.53
CCKBRP32239 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCKBRP32239 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCKBRP32239 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.34■□□□□ 0.53
CCKBRP32239 KRT18P56-201ENST00000507275 550 ntBASIC18.34■□□□□ 0.53
CCKBRP32239 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.34■□□□□ 0.53
CCKBRP32239 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.34■□□□□ 0.53
CCKBRP32239 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.34■□□□□ 0.53
CCKBRP32239 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.34■□□□□ 0.53
CCKBRP32239 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCKBRP32239 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCKBRP32239 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCKBRP32239 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCKBRP32239 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCKBRP32239 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CCKBRP32239 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.34■□□□□ 0.53
CCKBRP32239 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCKBRP32239 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCKBRP32239 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCKBRP32239 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCKBRP32239 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCKBRP32239 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CCKBRP32239 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCKBRP32239 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCKBRP32239 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCKBRP32239 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCKBRP32239 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
CCKBRP32239 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.33■□□□□ 0.53
CCKBRP32239 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.33■□□□□ 0.53
CCKBRP32239 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCKBRP32239 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCKBRP32239 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCKBRP32239 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCKBRP32239 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCKBRP32239 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CCKBRP32239 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCKBRP32239 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCKBRP32239 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.33■□□□□ 0.52
CCKBRP32239 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
CCKBRP32239 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.33■□□□□ 0.52
CCKBRP32239 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CCKBRP32239 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms