Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
COL8A2P25067 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
COL8A2P25067 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
COL8A2P25067 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.14■□□□□ 0.18
COL8A2P25067 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.14■□□□□ 0.18
COL8A2P25067 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
COL8A2P25067 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.14■□□□□ 0.17
COL8A2P25067 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
COL8A2P25067 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL8A2P25067 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL8A2P25067 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.14■□□□□ 0.17
COL8A2P25067 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL8A2P25067 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL8A2P25067 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
COL8A2P25067 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.14■□□□□ 0.17
COL8A2P25067 AC007663.1-201ENST00000438948 1240 ntBASIC16.14■□□□□ 0.17
COL8A2P25067 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.14■□□□□ 0.17
COL8A2P25067 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL8A2P25067 AL049597.2-201ENST00000565575 961 ntBASIC16.14■□□□□ 0.17
COL8A2P25067 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
COL8A2P25067 AL023803.3-201ENST00000615559 522 ntBASIC16.14■□□□□ 0.17
COL8A2P25067 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.14■□□□□ 0.17
COL8A2P25067 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
COL8A2P25067 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL8A2P25067 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.14■□□□□ 0.17
COL8A2P25067 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.14■□□□□ 0.17
COL8A2P25067 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COL8A2P25067 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.13■□□□□ 0.17
COL8A2P25067 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
COL8A2P25067 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.13■□□□□ 0.17
COL8A2P25067 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 SDHAP1-207ENST00000440850 2000 ntBASIC16.13■□□□□ 0.17
COL8A2P25067 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
COL8A2P25067 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.13■□□□□ 0.17
COL8A2P25067 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
COL8A2P25067 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COL8A2P25067 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.13■□□□□ 0.17
COL8A2P25067 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.13■□□□□ 0.17
COL8A2P25067 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.13■□□□□ 0.17
COL8A2P25067 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL8A2P25067 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 AC092338.2-201ENST00000568827 1415 ntBASIC16.12■□□□□ 0.17
COL8A2P25067 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
COL8A2P25067 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 HMGA1P5-201ENST00000412453 271 ntBASIC16.12■□□□□ 0.17
COL8A2P25067 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 TSPY17P-201ENST00000450329 467 ntBASIC16.12■□□□□ 0.17
COL8A2P25067 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.12■□□□□ 0.17
COL8A2P25067 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
COL8A2P25067 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.12■□□□□ 0.17
COL8A2P25067 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COL8A2P25067 AL353719.1-201ENST00000566847 864 ntBASIC16.12■□□□□ 0.17
COL8A2P25067 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
COL8A2P25067 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
COL8A2P25067 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
COL8A2P25067 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.12■□□□□ 0.17
COL8A2P25067 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL8A2P25067 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COL8A2P25067 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.12■□□□□ 0.17
COL8A2P25067 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
COL8A2P25067 AC125437.2-201ENST00000625180 2167 ntBASIC16.11■□□□□ 0.17
COL8A2P25067 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.11■□□□□ 0.17
COL8A2P25067 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.11■□□□□ 0.17
COL8A2P25067 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
COL8A2P25067 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.11■□□□□ 0.17
COL8A2P25067 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL8A2P25067 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
COL8A2P25067 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms