Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH1P12830 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH1P12830 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH1P12830 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH1P12830 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDH1P12830 NEFHP1-201ENST00000412845 2629 ntBASIC18.63■□□□□ 0.57
CDH1P12830 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH1P12830 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH1P12830 SDHAP1-207ENST00000440850 2000 ntBASIC18.63■□□□□ 0.57
CDH1P12830 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDH1P12830 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH1P12830 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH1P12830 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH1P12830 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH1P12830 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH1P12830 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH1P12830 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.63■□□□□ 0.57
CDH1P12830 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.63■□□□□ 0.57
CDH1P12830 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH1P12830 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH1P12830 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH1P12830 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH1P12830 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH1P12830 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH1P12830 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH1P12830 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH1P12830 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDH1P12830 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDH1P12830 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 UBE2SP1-201ENST00000450587 669 ntBASIC18.62■□□□□ 0.57
CDH1P12830 AP002982.1-201ENST00000492365 877 ntBASIC18.62■□□□□ 0.57
CDH1P12830 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH1P12830 RARRES2P10-201ENST00000564312 460 ntBASIC18.62■□□□□ 0.57
CDH1P12830 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.62■□□□□ 0.57
CDH1P12830 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.62■□□□□ 0.57
CDH1P12830 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.62■□□□□ 0.57
CDH1P12830 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.62■□□□□ 0.57
CDH1P12830 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.62■□□□□ 0.57
CDH1P12830 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.62■□□□□ 0.57
CDH1P12830 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDH1P12830 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDH1P12830 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDH1P12830 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.62■□□□□ 0.57
CDH1P12830 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH1P12830 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH1P12830 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDH1P12830 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH1P12830 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH1P12830 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH1P12830 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH1P12830 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH1P12830 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDH1P12830 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH1P12830 NIFKP9-201ENST00000419265 221 ntBASIC18.61■□□□□ 0.57
CDH1P12830 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.61■□□□□ 0.57
CDH1P12830 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH1P12830 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.61■□□□□ 0.57
CDH1P12830 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH1P12830 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.61■□□□□ 0.57
CDH1P12830 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDH1P12830 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH1P12830 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH1P12830 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDH1P12830 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH1P12830 AL138781.2-201ENST00000617896 1843 ntBASIC18.6■□□□□ 0.57
CDH1P12830 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH1P12830 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH1P12830 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH1P12830 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH1P12830 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH1P12830 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CDH1P12830 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH1P12830 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDH1P12830 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH1P12830 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH1P12830 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH1P12830 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH1P12830 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH1P12830 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH1P12830 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH1P12830 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH1P12830 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH1P12830 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.6■□□□□ 0.57
CDH1P12830 AF186192.3-201ENST00000583427 947 ntBASIC18.6■□□□□ 0.57
CDH1P12830 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH1P12830 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDH1P12830 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms