Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.24■□□□□ 0.35
CLUP10909 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.24■□□□□ 0.35
CLUP10909 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.24■□□□□ 0.35
CLUP10909 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.24■□□□□ 0.35
CLUP10909 GUSBP6-202ENST00000438529 1198 ntBASIC17.24■□□□□ 0.35
CLUP10909 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.24■□□□□ 0.35
CLUP10909 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.24■□□□□ 0.35
CLUP10909 AP006587.1-201ENST00000534129 1502 ntBASIC17.24■□□□□ 0.35
CLUP10909 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.24■□□□□ 0.35
CLUP10909 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLUP10909 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLUP10909 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CLUP10909 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.23■□□□□ 0.35
CLUP10909 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.23■□□□□ 0.35
CLUP10909 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.23■□□□□ 0.35
CLUP10909 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.23■□□□□ 0.35
CLUP10909 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.23■□□□□ 0.35
CLUP10909 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLUP10909 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.23■□□□□ 0.35
CLUP10909 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLUP10909 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.23■□□□□ 0.35
CLUP10909 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.23■□□□□ 0.35
CLUP10909 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.23■□□□□ 0.35
CLUP10909 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.23■□□□□ 0.35
CLUP10909 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CLUP10909 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.23■□□□□ 0.35
CLUP10909 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 AC092368.3-202ENST00000574180 1591 ntBASIC17.23■□□□□ 0.35
CLUP10909 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLUP10909 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.22■□□□□ 0.35
CLUP10909 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.22■□□□□ 0.35
CLUP10909 KRT8P8-201ENST00000434750 1448 ntBASIC17.22■□□□□ 0.35
CLUP10909 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CLUP10909 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.22■□□□□ 0.35
CLUP10909 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.22■□□□□ 0.35
CLUP10909 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLUP10909 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLUP10909 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.22■□□□□ 0.35
CLUP10909 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.22■□□□□ 0.35
CLUP10909 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.22■□□□□ 0.35
CLUP10909 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLUP10909 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.22■□□□□ 0.35
CLUP10909 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLUP10909 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLUP10909 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.22■□□□□ 0.35
CLUP10909 PKD1P1-201ENST00000458669 6805 ntBASIC17.22■□□□□ 0.35
CLUP10909 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLUP10909 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.22■□□□□ 0.35
CLUP10909 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.22■□□□□ 0.35
CLUP10909 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLUP10909 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLUP10909 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLUP10909 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CLUP10909 IRX1P1-201ENST00000438849 1838 ntBASIC17.21■□□□□ 0.35
CLUP10909 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLUP10909 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLUP10909 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLUP10909 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLUP10909 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.21■□□□□ 0.35
CLUP10909 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLUP10909 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLUP10909 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLUP10909 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLUP10909 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.21■□□□□ 0.35
CLUP10909 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.21■□□□□ 0.35
CLUP10909 YBX1P10-201ENST00000444752 975 ntBASIC17.21■□□□□ 0.35
CLUP10909 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.21■□□□□ 0.35
CLUP10909 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.21■□□□□ 0.35
CLUP10909 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms