Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.16■□□□□ 0.02
PF4V1P10720 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PF4V1P10720 AC131212.4-201ENST00000623606 975 ntBASIC15.16■□□□□ 0.02
PF4V1P10720 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.16■□□□□ 0.02
PF4V1P10720 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.16■□□□□ 0.02
PF4V1P10720 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PF4V1P10720 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PF4V1P10720 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PF4V1P10720 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PF4V1P10720 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.16■□□□□ 0.02
PF4V1P10720 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PF4V1P10720 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.16■□□□□ 0.02
PF4V1P10720 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.16■□□□□ 0.02
PF4V1P10720 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.15■□□□□ 0.02
PF4V1P10720 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.15■□□□□ 0.02
PF4V1P10720 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.15■□□□□ 0.02
PF4V1P10720 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.15■□□□□ 0.02
PF4V1P10720 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PF4V1P10720 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.15■□□□□ 0.02
PF4V1P10720 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.15■□□□□ 0.02
PF4V1P10720 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.15■□□□□ 0.02
PF4V1P10720 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.15■□□□□ 0.02
PF4V1P10720 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.15■□□□□ 0.02
PF4V1P10720 RN7SL850P-201ENST00000579959 291 ntBASIC15.15■□□□□ 0.02
PF4V1P10720 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.15■□□□□ 0.02
PF4V1P10720 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PF4V1P10720 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PF4V1P10720 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.15■□□□□ 0.02
PF4V1P10720 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PF4V1P10720 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.15■□□□□ 0.02
PF4V1P10720 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.15■□□□□ 0.02
PF4V1P10720 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.15■□□□□ 0.02
PF4V1P10720 KRT18P22-201ENST00000402024 1347 ntBASIC15.15■□□□□ 0.02
PF4V1P10720 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PF4V1P10720 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PF4V1P10720 FSCN1P1-201ENST00000568912 1481 ntBASIC15.14■□□□□ 0.01
PF4V1P10720 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PF4V1P10720 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.14■□□□□ 0.01
PF4V1P10720 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.14■□□□□ 0.01
PF4V1P10720 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PF4V1P10720 AL390955.1-201ENST00000428694 934 ntBASIC15.14■□□□□ 0.01
PF4V1P10720 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.14■□□□□ 0.01
PF4V1P10720 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.14■□□□□ 0.01
PF4V1P10720 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.14■□□□□ 0.01
PF4V1P10720 AC026271.3-201ENST00000571884 352 ntBASIC15.14■□□□□ 0.01
PF4V1P10720 AL445675.2-201ENST00000620291 557 ntBASIC15.14■□□□□ 0.01
PF4V1P10720 HLA-A-209ENST00000638375 975 ntBASIC15.14■□□□□ 0.01
PF4V1P10720 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PF4V1P10720 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
PF4V1P10720 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PF4V1P10720 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PF4V1P10720 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.13■□□□□ 0.01
PF4V1P10720 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PF4V1P10720 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PF4V1P10720 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms