Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDCD6O75340 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
PDCD6O75340 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDCD6O75340 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDCD6O75340 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PDCD6O75340 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.15■□□□□ 0.18
PDCD6O75340 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PDCD6O75340 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.15■□□□□ 0.18
PDCD6O75340 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDCD6O75340 AL512353.2-201ENST00000448759 1962 ntBASIC16.15■□□□□ 0.18
PDCD6O75340 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDCD6O75340 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.14■□□□□ 0.18
PDCD6O75340 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.14■□□□□ 0.17
PDCD6O75340 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PDCD6O75340 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.14■□□□□ 0.17
PDCD6O75340 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PDCD6O75340 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.14■□□□□ 0.17
PDCD6O75340 WIZP1-201ENST00000531444 2299 ntBASIC16.14■□□□□ 0.17
PDCD6O75340 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.14■□□□□ 0.17
PDCD6O75340 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.14■□□□□ 0.17
PDCD6O75340 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.14■□□□□ 0.17
PDCD6O75340 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.14■□□□□ 0.17
PDCD6O75340 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.14■□□□□ 0.17
PDCD6O75340 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PDCD6O75340 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PDCD6O75340 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDCD6O75340 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
PDCD6O75340 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PDCD6O75340 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PDCD6O75340 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.13■□□□□ 0.17
PDCD6O75340 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PDCD6O75340 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.13■□□□□ 0.17
PDCD6O75340 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.13■□□□□ 0.17
PDCD6O75340 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.13■□□□□ 0.17
PDCD6O75340 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.13■□□□□ 0.17
PDCD6O75340 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.13■□□□□ 0.17
PDCD6O75340 AC098934.4-201ENST00000564127 592 ntBASIC16.13■□□□□ 0.17
PDCD6O75340 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 AL138781.1-201ENST00000566567 1274 ntBASIC16.13■□□□□ 0.17
PDCD6O75340 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.13■□□□□ 0.17
PDCD6O75340 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PDCD6O75340 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.13■□□□□ 0.17
PDCD6O75340 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PDCD6O75340 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.13■□□□□ 0.17
PDCD6O75340 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 AC009113.1-201ENST00000570267 2443 ntBASIC16.13■□□□□ 0.17
PDCD6O75340 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PDCD6O75340 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PDCD6O75340 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDCD6O75340 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDCD6O75340 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDCD6O75340 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDCD6O75340 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.12■□□□□ 0.17
PDCD6O75340 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDCD6O75340 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDCD6O75340 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDCD6O75340 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDCD6O75340 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDCD6O75340 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PDCD6O75340 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PDCD6O75340 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDCD6O75340 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PDCD6O75340 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.12■□□□□ 0.17
PDCD6O75340 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.12■□□□□ 0.17
PDCD6O75340 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDCD6O75340 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PDCD6O75340 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms