Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTNSO60931 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNSO60931 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNSO60931 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CTNSO60931 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.93■□□□□ 0.46
CTNSO60931 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.93■□□□□ 0.46
CTNSO60931 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.93■□□□□ 0.46
CTNSO60931 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNSO60931 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNSO60931 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTNSO60931 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.93■□□□□ 0.46
CTNSO60931 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.92■□□□□ 0.46
CTNSO60931 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.92■□□□□ 0.46
CTNSO60931 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CTNSO60931 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CTNSO60931 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNSO60931 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNSO60931 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.92■□□□□ 0.46
CTNSO60931 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNSO60931 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNSO60931 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNSO60931 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNSO60931 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CTNSO60931 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNSO60931 CRYGFP-201ENST00000418459 633 ntBASIC17.92■□□□□ 0.46
CTNSO60931 FITM1-202ENST00000559294 800 ntBASIC17.92■□□□□ 0.46
CTNSO60931 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.92■□□□□ 0.46
CTNSO60931 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNSO60931 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTNSO60931 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CTNSO60931 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CTNSO60931 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CTNSO60931 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CTNSO60931 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.92■□□□□ 0.46
CTNSO60931 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.92■□□□□ 0.46
CTNSO60931 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNSO60931 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.91■□□□□ 0.46
CTNSO60931 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.91■□□□□ 0.46
CTNSO60931 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTNSO60931 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.91■□□□□ 0.46
CTNSO60931 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNSO60931 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNSO60931 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNSO60931 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.91■□□□□ 0.46
CTNSO60931 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNSO60931 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTNSO60931 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNSO60931 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNSO60931 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNSO60931 MFAP1P1-201ENST00000442257 1255 ntBASIC17.91■□□□□ 0.46
CTNSO60931 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNSO60931 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNSO60931 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.91■□□□□ 0.46
CTNSO60931 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.91■□□□□ 0.46
CTNSO60931 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.91■□□□□ 0.46
CTNSO60931 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTNSO60931 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNSO60931 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNSO60931 FEM1AP3-201ENST00000403722 1741 ntBASIC17.91■□□□□ 0.46
CTNSO60931 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.91■□□□□ 0.46
CTNSO60931 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTNSO60931 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNSO60931 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNSO60931 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNSO60931 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNSO60931 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNSO60931 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNSO60931 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNSO60931 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CTNSO60931 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.91■□□□□ 0.46
CTNSO60931 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.9■□□□□ 0.46
CTNSO60931 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNSO60931 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNSO60931 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNSO60931 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNSO60931 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTNSO60931 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNSO60931 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.9■□□□□ 0.46
CTNSO60931 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNSO60931 MMP23A-201ENST00000234610 1017 ntBASIC17.9■□□□□ 0.46
CTNSO60931 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNSO60931 MIR1238-201ENST00000408483 83 ntBASIC17.9■□□□□ 0.46
CTNSO60931 BX088651.1-201ENST00000540551 451 ntBASIC17.9■□□□□ 0.46
CTNSO60931 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTNSO60931 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.9■□□□□ 0.46
CTNSO60931 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNSO60931 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNSO60931 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CTNSO60931 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNSO60931 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.89■□□□□ 0.46
CTNSO60931 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTNSO60931 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.89■□□□□ 0.46
CTNSO60931 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNSO60931 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.89■□□□□ 0.45
CTNSO60931 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.89■□□□□ 0.45
CTNSO60931 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNSO60931 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CTNSO60931 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNSO60931 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNSO60931 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms