Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.6■□□□□ 0.57
PEX1O43933 KRT8P36-201ENST00000489121 1440 ntBASIC18.6■□□□□ 0.57
PEX1O43933 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.6■□□□□ 0.57
PEX1O43933 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PEX1O43933 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PEX1O43933 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.6■□□□□ 0.57
PEX1O43933 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PEX1O43933 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 UNC93B4-201ENST00000505679 747 ntBASIC18.6■□□□□ 0.57
PEX1O43933 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.6■□□□□ 0.57
PEX1O43933 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.6■□□□□ 0.57
PEX1O43933 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.6■□□□□ 0.57
PEX1O43933 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
PEX1O43933 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.6■□□□□ 0.57
PEX1O43933 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PEX1O43933 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PEX1O43933 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.59■□□□□ 0.57
PEX1O43933 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PEX1O43933 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.59■□□□□ 0.57
PEX1O43933 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.59■□□□□ 0.57
PEX1O43933 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PEX1O43933 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.59■□□□□ 0.57
PEX1O43933 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.59■□□□□ 0.57
PEX1O43933 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.59■□□□□ 0.57
PEX1O43933 AC008403.3-201ENST00000598924 454 ntBASIC18.59■□□□□ 0.57
PEX1O43933 AC073648.6-201ENST00000641589 218 ntBASIC18.59■□□□□ 0.57
PEX1O43933 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PEX1O43933 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.59■□□□□ 0.57
PEX1O43933 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PEX1O43933 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
PEX1O43933 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.59■□□□□ 0.57
PEX1O43933 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.59■□□□□ 0.57
PEX1O43933 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PEX1O43933 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.59■□□□□ 0.57
PEX1O43933 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEX1O43933 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PEX1O43933 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PEX1O43933 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PEX1O43933 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PEX1O43933 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.58■□□□□ 0.57
PEX1O43933 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PEX1O43933 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.58■□□□□ 0.57
PEX1O43933 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEX1O43933 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEX1O43933 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PEX1O43933 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEX1O43933 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEX1O43933 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PEX1O43933 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.58■□□□□ 0.56
PEX1O43933 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.58■□□□□ 0.56
PEX1O43933 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.58■□□□□ 0.56
PEX1O43933 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.58■□□□□ 0.56
PEX1O43933 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.58■□□□□ 0.56
PEX1O43933 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEX1O43933 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
PEX1O43933 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEX1O43933 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PEX1O43933 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEX1O43933 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEX1O43933 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.58■□□□□ 0.56
PEX1O43933 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX1O43933 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PEX1O43933 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.57■□□□□ 0.56
PEX1O43933 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
PEX1O43933 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX1O43933 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX1O43933 AC068880.1-201ENST00000507289 2297 ntBASIC18.57■□□□□ 0.56
PEX1O43933 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PEX1O43933 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms