Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSNA1O43805 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SSNA1O43805 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSNA1O43805 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSNA1O43805 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSNA1O43805 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSNA1O43805 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSNA1O43805 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.29■□□□□ 0.2
SSNA1O43805 AC133561.4-201ENST00000566112 224 ntBASIC16.29■□□□□ 0.2
SSNA1O43805 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.29■□□□□ 0.2
SSNA1O43805 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SSNA1O43805 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSNA1O43805 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.29■□□□□ 0.2
SSNA1O43805 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SSNA1O43805 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSNA1O43805 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.29■□□□□ 0.2
SSNA1O43805 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
SSNA1O43805 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSNA1O43805 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSNA1O43805 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.29■□□□□ 0.2
SSNA1O43805 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SSNA1O43805 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.28■□□□□ 0.2
SSNA1O43805 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.28■□□□□ 0.2
SSNA1O43805 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 AC008764.6-201ENST00000595909 2069 ntBASIC16.28■□□□□ 0.2
SSNA1O43805 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.28■□□□□ 0.2
SSNA1O43805 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.28■□□□□ 0.2
SSNA1O43805 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.28■□□□□ 0.2
SSNA1O43805 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.28■□□□□ 0.2
SSNA1O43805 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.28■□□□□ 0.2
SSNA1O43805 AL356740.2-201ENST00000601559 647 ntBASIC16.28■□□□□ 0.2
SSNA1O43805 AC011298.3-201ENST00000615796 283 ntBASIC16.28■□□□□ 0.2
SSNA1O43805 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SSNA1O43805 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SSNA1O43805 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.28■□□□□ 0.2
SSNA1O43805 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.28■□□□□ 0.2
SSNA1O43805 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SSNA1O43805 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.28■□□□□ 0.2
SSNA1O43805 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SSNA1O43805 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SSNA1O43805 ESPNP-201ENST00000270691 2015 ntBASIC16.28■□□□□ 0.2
SSNA1O43805 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSNA1O43805 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.27■□□□□ 0.2
SSNA1O43805 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SSNA1O43805 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.27■□□□□ 0.2
SSNA1O43805 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 AC124067.4-201ENST00000519691 2379 ntBASIC16.27■□□□□ 0.2
SSNA1O43805 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
SSNA1O43805 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.27■□□□□ 0.2
SSNA1O43805 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SSNA1O43805 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
SSNA1O43805 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SSNA1O43805 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
SSNA1O43805 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSNA1O43805 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSNA1O43805 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSNA1O43805 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSNA1O43805 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SSNA1O43805 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSNA1O43805 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SSNA1O43805 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SSNA1O43805 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SSNA1O43805 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSNA1O43805 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.27■□□□□ 0.19
SSNA1O43805 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSNA1O43805 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.26■□□□□ 0.19
SSNA1O43805 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSNA1O43805 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSNA1O43805 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSNA1O43805 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms