Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC3O15379 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.61■□□□□ 0.57
HDAC3O15379 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.61■□□□□ 0.57
HDAC3O15379 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.61■□□□□ 0.57
HDAC3O15379 RAP2CP1-201ENST00000605103 478 ntBASIC18.61■□□□□ 0.57
HDAC3O15379 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC3O15379 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC3O15379 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.61■□□□□ 0.57
HDAC3O15379 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC3O15379 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.61■□□□□ 0.57
HDAC3O15379 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HDAC3O15379 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC3O15379 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HDAC3O15379 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.6■□□□□ 0.57
HDAC3O15379 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
HDAC3O15379 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HDAC3O15379 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC3O15379 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.6■□□□□ 0.57
HDAC3O15379 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC3O15379 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
HDAC3O15379 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC3O15379 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
HDAC3O15379 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC3O15379 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.6■□□□□ 0.57
HDAC3O15379 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HDAC3O15379 BX276092.2-201ENST00000417668 665 ntBASIC18.6■□□□□ 0.57
HDAC3O15379 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.6■□□□□ 0.57
HDAC3O15379 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.6■□□□□ 0.57
HDAC3O15379 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC3O15379 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.6■□□□□ 0.57
HDAC3O15379 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC3O15379 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC3O15379 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC3O15379 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.6■□□□□ 0.57
HDAC3O15379 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.6■□□□□ 0.57
HDAC3O15379 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC3O15379 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.6■□□□□ 0.57
HDAC3O15379 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC3O15379 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.59■□□□□ 0.57
HDAC3O15379 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HDAC3O15379 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.59■□□□□ 0.57
HDAC3O15379 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.59■□□□□ 0.57
HDAC3O15379 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HDAC3O15379 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.59■□□□□ 0.57
HDAC3O15379 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.59■□□□□ 0.57
HDAC3O15379 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.59■□□□□ 0.57
HDAC3O15379 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.59■□□□□ 0.57
HDAC3O15379 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.59■□□□□ 0.57
HDAC3O15379 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HDAC3O15379 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.59■□□□□ 0.57
HDAC3O15379 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 AC006557.6-201ENST00000623071 864 ntBASIC18.59■□□□□ 0.57
HDAC3O15379 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.59■□□□□ 0.57
HDAC3O15379 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.59■□□□□ 0.57
HDAC3O15379 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HDAC3O15379 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HDAC3O15379 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.59■□□□□ 0.57
HDAC3O15379 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.59■□□□□ 0.57
HDAC3O15379 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.59■□□□□ 0.57
HDAC3O15379 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.59■□□□□ 0.57
HDAC3O15379 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC3O15379 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.59■□□□□ 0.57
HDAC3O15379 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.59■□□□□ 0.57
HDAC3O15379 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HDAC3O15379 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HDAC3O15379 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HDAC3O15379 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HDAC3O15379 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HDAC3O15379 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
HDAC3O15379 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
HDAC3O15379 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
HDAC3O15379 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HDAC3O15379 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
HDAC3O15379 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HDAC3O15379 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HDAC3O15379 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.58■□□□□ 0.57
HDAC3O15379 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.58■□□□□ 0.57
HDAC3O15379 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HDAC3O15379 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.58■□□□□ 0.56
HDAC3O15379 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HDAC3O15379 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.58■□□□□ 0.56
HDAC3O15379 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HDAC3O15379 AL121906.2-201ENST00000621597 723 ntBASIC18.58■□□□□ 0.56
HDAC3O15379 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms