Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD9O15198 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD9O15198 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMAD9O15198 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD9O15198 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.36■□□□□ 0.37
SMAD9O15198 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD9O15198 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.35■□□□□ 0.37
SMAD9O15198 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD9O15198 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD9O15198 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD9O15198 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD9O15198 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SMAD9O15198 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD9O15198 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.35■□□□□ 0.37
SMAD9O15198 AC116562.4-201ENST00000641316 2276 ntBASIC17.35■□□□□ 0.37
SMAD9O15198 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD9O15198 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD9O15198 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD9O15198 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD9O15198 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.35■□□□□ 0.37
SMAD9O15198 RPS2P4-201ENST00000476944 856 ntBASIC17.35■□□□□ 0.37
SMAD9O15198 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.35■□□□□ 0.37
SMAD9O15198 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SMAD9O15198 AC073195.1-201ENST00000607241 877 ntBASIC17.35■□□□□ 0.37
SMAD9O15198 AL049637.2-201ENST00000641778 930 ntBASIC17.35■□□□□ 0.37
SMAD9O15198 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.35■□□□□ 0.37
SMAD9O15198 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD9O15198 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD9O15198 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD9O15198 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SMAD9O15198 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SMAD9O15198 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD9O15198 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD9O15198 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD9O15198 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SMAD9O15198 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD9O15198 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD9O15198 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD9O15198 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD9O15198 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SMAD9O15198 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD9O15198 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD9O15198 KSR1P1-201ENST00000446298 240 ntBASIC17.34■□□□□ 0.37
SMAD9O15198 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD9O15198 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SMAD9O15198 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SMAD9O15198 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SMAD9O15198 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SMAD9O15198 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SMAD9O15198 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD9O15198 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.34■□□□□ 0.37
SMAD9O15198 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD9O15198 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD9O15198 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.34■□□□□ 0.37
SMAD9O15198 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.34■□□□□ 0.37
SMAD9O15198 AC113410.3-201ENST00000623366 203 ntBASIC17.34■□□□□ 0.37
SMAD9O15198 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.34■□□□□ 0.37
SMAD9O15198 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD9O15198 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SMAD9O15198 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.34■□□□□ 0.37
SMAD9O15198 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SMAD9O15198 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SMAD9O15198 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMAD9O15198 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.33■□□□□ 0.37
SMAD9O15198 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SMAD9O15198 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMAD9O15198 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SMAD9O15198 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMAD9O15198 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMAD9O15198 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMAD9O15198 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMAD9O15198 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD9O15198 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SMAD9O15198 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD9O15198 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SMAD9O15198 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD9O15198 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD9O15198 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD9O15198 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SMAD9O15198 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SMAD9O15198 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.33■□□□□ 0.36
SMAD9O15198 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.33■□□□□ 0.36
SMAD9O15198 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.33■□□□□ 0.36
SMAD9O15198 AP001412.1-201ENST00000608405 714 ntBASIC17.33■□□□□ 0.36
SMAD9O15198 AL445675.2-201ENST00000620291 557 ntBASIC17.33■□□□□ 0.36
SMAD9O15198 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.33■□□□□ 0.36
SMAD9O15198 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.33■□□□□ 0.36
SMAD9O15198 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD9O15198 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD9O15198 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD9O15198 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD9O15198 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD9O15198 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.33■□□□□ 0.36
SMAD9O15198 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD9O15198 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
SMAD9O15198 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD9O15198 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD9O15198 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD9O15198 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.32■□□□□ 0.36
SMAD9O15198 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms