Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.12■□□□□ 0.65
COPEO14579 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
COPEO14579 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.12■□□□□ 0.65
COPEO14579 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COPEO14579 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COPEO14579 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COPEO14579 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
COPEO14579 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.12■□□□□ 0.65
COPEO14579 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPEO14579 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
COPEO14579 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPEO14579 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COPEO14579 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPEO14579 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPEO14579 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPEO14579 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPEO14579 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.11■□□□□ 0.65
COPEO14579 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.11■□□□□ 0.65
COPEO14579 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPEO14579 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COPEO14579 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.11■□□□□ 0.65
COPEO14579 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPEO14579 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
COPEO14579 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPEO14579 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COPEO14579 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
COPEO14579 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COPEO14579 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.11■□□□□ 0.65
COPEO14579 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.11■□□□□ 0.65
COPEO14579 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.11■□□□□ 0.65
COPEO14579 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPEO14579 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.11■□□□□ 0.65
COPEO14579 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.11■□□□□ 0.65
COPEO14579 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPEO14579 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COPEO14579 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
COPEO14579 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.11■□□□□ 0.65
COPEO14579 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.1■□□□□ 0.65
COPEO14579 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
COPEO14579 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.1■□□□□ 0.65
COPEO14579 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
COPEO14579 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
COPEO14579 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
COPEO14579 AL354751.1-201ENST00000412768 1863 ntBASIC19.1■□□□□ 0.65
COPEO14579 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.1■□□□□ 0.65
COPEO14579 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 AC124283.5-201ENST00000624661 1809 ntBASIC19.1■□□□□ 0.65
COPEO14579 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.1■□□□□ 0.65
COPEO14579 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.1■□□□□ 0.65
COPEO14579 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.1■□□□□ 0.65
COPEO14579 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPEO14579 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
COPEO14579 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.09■□□□□ 0.65
COPEO14579 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.09■□□□□ 0.65
COPEO14579 FEM1AP3-201ENST00000403722 1741 ntBASIC19.09■□□□□ 0.65
COPEO14579 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
COPEO14579 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.09■□□□□ 0.65
COPEO14579 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.09■□□□□ 0.65
COPEO14579 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.09■□□□□ 0.65
COPEO14579 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.09■□□□□ 0.65
COPEO14579 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.09■□□□□ 0.65
COPEO14579 AC133552.2-202ENST00000575694 574 ntBASIC19.09■□□□□ 0.65
COPEO14579 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.09■□□□□ 0.65
COPEO14579 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
COPEO14579 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
COPEO14579 AP006587.1-201ENST00000534129 1502 ntBASIC19.09■□□□□ 0.65
COPEO14579 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPEO14579 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms