Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CDC7O00311 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CDC7O00311 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.76■□□□□ 0.59
CDC7O00311 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CDC7O00311 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.76■□□□□ 0.59
CDC7O00311 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.76■□□□□ 0.59
CDC7O00311 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.76■□□□□ 0.59
CDC7O00311 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.76■□□□□ 0.59
CDC7O00311 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.76■□□□□ 0.59
CDC7O00311 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC7O00311 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDC7O00311 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC7O00311 KRT8P41-201ENST00000533985 1514 ntBASIC18.75■□□□□ 0.59
CDC7O00311 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDC7O00311 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC7O00311 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDC7O00311 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.75■□□□□ 0.59
CDC7O00311 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDC7O00311 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDC7O00311 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC7O00311 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CDC7O00311 C1QBPP2-201ENST00000528754 825 ntBASIC18.75■□□□□ 0.59
CDC7O00311 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDC7O00311 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC7O00311 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.75■□□□□ 0.59
CDC7O00311 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.75■□□□□ 0.59
CDC7O00311 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC7O00311 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.75■□□□□ 0.59
CDC7O00311 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.75■□□□□ 0.59
CDC7O00311 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC7O00311 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.75■□□□□ 0.59
CDC7O00311 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDC7O00311 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CDC7O00311 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
CDC7O00311 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CDC7O00311 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.74■□□□□ 0.59
CDC7O00311 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 TSPY23P-201ENST00000440136 739 ntBASIC18.74■□□□□ 0.59
CDC7O00311 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.74■□□□□ 0.59
CDC7O00311 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.74■□□□□ 0.59
CDC7O00311 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.74■□□□□ 0.59
CDC7O00311 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.74■□□□□ 0.59
CDC7O00311 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.74■□□□□ 0.59
CDC7O00311 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.74■□□□□ 0.59
CDC7O00311 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC7O00311 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.73■□□□□ 0.59
CDC7O00311 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDC7O00311 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.73■□□□□ 0.59
CDC7O00311 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDC7O00311 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDC7O00311 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDC7O00311 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDC7O00311 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CDC7O00311 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.73■□□□□ 0.59
CDC7O00311 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CDC7O00311 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.73■□□□□ 0.59
CDC7O00311 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.73■□□□□ 0.59
CDC7O00311 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.73■□□□□ 0.59
CDC7O00311 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC7O00311 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDC7O00311 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms