Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC188H7C350 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC188H7C350 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
CCDC188H7C350 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC188H7C350 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCDC188H7C350 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC188H7C350 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC188H7C350 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC188H7C350 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC188H7C350 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC188H7C350 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC188H7C350 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC188H7C350 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC188H7C350 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC188H7C350 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC188H7C350 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC188H7C350 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC188H7C350 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC188H7C350 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC188H7C350 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC188H7C350 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC188H7C350 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC188H7C350 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC188H7C350 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC188H7C350 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC188H7C350 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC188H7C350 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC188H7C350 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC188H7C350 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC188H7C350 RPS2P52-201ENST00000469610 820 ntBASIC19.88■□□□□ 0.77
CCDC188H7C350 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC188H7C350 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC188H7C350 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC188H7C350 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC188H7C350 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC188H7C350 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC188H7C350 ABALON-201ENST00000629058 1903 ntBASIC19.88■□□□□ 0.77
CCDC188H7C350 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC188H7C350 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC188H7C350 AC124283.5-201ENST00000624661 1809 ntBASIC19.88■□□□□ 0.77
CCDC188H7C350 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC188H7C350 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC188H7C350 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC188H7C350 PCDHB18P-201ENST00000524813 2368 ntBASIC19.87■□□□□ 0.77
CCDC188H7C350 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC188H7C350 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC188H7C350 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC188H7C350 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC188H7C350 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC188H7C350 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC188H7C350 AL121906.2-201ENST00000621597 723 ntBASIC19.87■□□□□ 0.77
CCDC188H7C350 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC188H7C350 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC188H7C350 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC188H7C350 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC188H7C350 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC188H7C350 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC188H7C350 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC188H7C350 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC188H7C350 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC188H7C350 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC188H7C350 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC188H7C350 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC188H7C350 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC188H7C350 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC188H7C350 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC188H7C350 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC188H7C350 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 AC073592.3-201ENST00000625118 1834 ntBASIC19.86■□□□□ 0.77
CCDC188H7C350 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC188H7C350 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC188H7C350 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC188H7C350 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CCDC188H7C350 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.86■□□□□ 0.77
CCDC188H7C350 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC188H7C350 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC188H7C350 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC188H7C350 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC188H7C350 AC068880.1-201ENST00000507289 2297 ntBASIC19.86■□□□□ 0.77
CCDC188H7C350 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC188H7C350 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC188H7C350 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC188H7C350 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC188H7C350 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC188H7C350 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms