Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AP006587.1-201ENST00000534129 1502 ntBASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.38■□□□□ 0.05
TCRBV4S1A1TA0A5B7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AL355075.4-201ENST00000554988 638 ntBASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AP003071.4-201ENST00000562276 1284 ntBASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.37■□□□□ 0.05
TCRBV4S1A1TA0A5B7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AC093503.3-201ENST00000624917 2352 ntBASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.36■□□□□ 0.05
TCRBV4S1A1TA0A5B7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms