Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TCRBV3S1A0A5B6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 AC068338.2-201ENST00000563278 1430 ntBASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 AL589743.5-201ENST00000616611 1050 ntBASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TCRBV3S1A0A5B6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 PRORSD1P-202ENST00000563365 2154 ntBASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 LINC00896-202ENST00000609602 2128 ntBASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TCRBV3S1A0A5B6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TCRBV3S1A0A5B6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TCRBV3S1A0A5B6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.89■□□□□ 0.46
TCRBV3S1A0A5B6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.89■□□□□ 0.45
TCRBV3S1A0A5B6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TCRBV3S1A0A5B6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms