Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 TSPY21P-201ENST00000433481 731 ntBASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AC005829.2-201ENST00000571422 1056 ntBASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AP006587.1-201ENST00000534129 1502 ntBASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 RAP2CP1-201ENST00000605103 478 ntBASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AC231657.2-201ENST00000624556 255 ntBASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AC137761.2-201ENST00000561729 223 ntBASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AC145350.3-201ENST00000569033 163 ntBASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV6-1A0A0K0K1D8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-1A0A0K0K1D8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRBV6-1A0A0K0K1D8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-1A0A0K0K1D8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
TRBV6-1A0A0K0K1D8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-1A0A0K0K1D8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.27□□□□□ -0.12
TRBV6-1A0A0K0K1D8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.27□□□□□ -0.12
TRBV6-1A0A0K0K1D8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-1A0A0K0K1D8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.27□□□□□ -0.12
TRBV6-1A0A0K0K1D8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRBV6-1A0A0K0K1D8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-1A0A0K0K1D8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-1A0A0K0K1D8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-1A0A0K0K1D8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms