Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.73■■■□□ 2.51
PCDHAC2Q9Y5I4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PCDHAC2Q9Y5I4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCDHAC2Q9Y5I4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PCDHAC2Q9Y5I4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PCDHAC2Q9Y5I4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PCDHAC2Q9Y5I4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PCDHAC2Q9Y5I4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCDHAC2Q9Y5I4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.71■■■□□ 2.51
PCDHAC2Q9Y5I4 AL033527.3-201ENST00000566366 1196 ntBASIC30.71■■■□□ 2.51
PCDHAC2Q9Y5I4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.71■■■□□ 2.51
PCDHAC2Q9Y5I4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PCDHAC2Q9Y5I4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PCDHAC2Q9Y5I4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PCDHAC2Q9Y5I4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
PCDHAC2Q9Y5I4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PCDHAC2Q9Y5I4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.7■■■□□ 2.5
PCDHAC2Q9Y5I4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
PCDHAC2Q9Y5I4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PCDHAC2Q9Y5I4 AC018358.1-201ENST00000631079 1402 ntBASIC30.69■■■□□ 2.5
PCDHAC2Q9Y5I4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
PCDHAC2Q9Y5I4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.69■■■□□ 2.5
PCDHAC2Q9Y5I4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
PCDHAC2Q9Y5I4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDHAC2Q9Y5I4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.68■■■□□ 2.5
PCDHAC2Q9Y5I4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHAC2Q9Y5I4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.67■■■□□ 2.5
PCDHAC2Q9Y5I4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
PCDHAC2Q9Y5I4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHAC2Q9Y5I4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHAC2Q9Y5I4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHAC2Q9Y5I4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.66■■■□□ 2.5
PCDHAC2Q9Y5I4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
PCDHAC2Q9Y5I4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHAC2Q9Y5I4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.66■■■□□ 2.5
PCDHAC2Q9Y5I4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHAC2Q9Y5I4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHAC2Q9Y5I4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
PCDHAC2Q9Y5I4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
PCDHAC2Q9Y5I4 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.65■■■□□ 2.5
PCDHAC2Q9Y5I4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PCDHAC2Q9Y5I4 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.65■■■□□ 2.5
PCDHAC2Q9Y5I4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.64■■■□□ 2.5
PCDHAC2Q9Y5I4 AC092296.2-201ENST00000589470 999 ntBASIC30.64■■■□□ 2.5
PCDHAC2Q9Y5I4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
PCDHAC2Q9Y5I4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCDHAC2Q9Y5I4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCDHAC2Q9Y5I4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.63■■■□□ 2.49
PCDHAC2Q9Y5I4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PCDHAC2Q9Y5I4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.62■■■□□ 2.49
PCDHAC2Q9Y5I4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PCDHAC2Q9Y5I4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
PCDHAC2Q9Y5I4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.61■■■□□ 2.49
PCDHAC2Q9Y5I4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PCDHAC2Q9Y5I4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.6■■■□□ 2.49
PCDHAC2Q9Y5I4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.6■■■□□ 2.49
PCDHAC2Q9Y5I4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.6■■■□□ 2.49
PCDHAC2Q9Y5I4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCDHAC2Q9Y5I4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PCDHAC2Q9Y5I4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PCDHAC2Q9Y5I4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.57■■■□□ 2.48
PCDHAC2Q9Y5I4 KRT18P60-201ENST00000312876 1297 ntBASIC30.57■■■□□ 2.48
PCDHAC2Q9Y5I4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
PCDHAC2Q9Y5I4 GFER-205ENST00000569451 517 ntTSL 5 BASIC30.57■■■□□ 2.48
PCDHAC2Q9Y5I4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.57■■■□□ 2.48
PCDHAC2Q9Y5I4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.56■■■□□ 2.48
PCDHAC2Q9Y5I4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCDHAC2Q9Y5I4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCDHAC2Q9Y5I4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.55■■■□□ 2.48
PCDHAC2Q9Y5I4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCDHAC2Q9Y5I4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCDHAC2Q9Y5I4 ST7-AS1-201ENST00000456775 1889 ntBASIC30.55■■■□□ 2.48
PCDHAC2Q9Y5I4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
PCDHAC2Q9Y5I4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.54■■■□□ 2.48
PCDHAC2Q9Y5I4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PCDHAC2Q9Y5I4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PCDHAC2Q9Y5I4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
PCDHAC2Q9Y5I4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PCDHAC2Q9Y5I4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
PCDHAC2Q9Y5I4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC30.52■■■□□ 2.48
PCDHAC2Q9Y5I4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
PCDHAC2Q9Y5I4 AC004987.1-201ENST00000428627 508 ntBASIC30.51■■■□□ 2.47
PCDHAC2Q9Y5I4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
PCDHAC2Q9Y5I4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC30.51■■■□□ 2.47
PCDHAC2Q9Y5I4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PCDHAC2Q9Y5I4 AL157400.5-201ENST00000507624 621 ntBASIC30.5■■■□□ 2.47
PCDHAC2Q9Y5I4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
PCDHAC2Q9Y5I4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCDHAC2Q9Y5I4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.49■■■□□ 2.47
PCDHAC2Q9Y5I4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCDHAC2Q9Y5I4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.48■■■□□ 2.47
PCDHAC2Q9Y5I4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
PCDHAC2Q9Y5I4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PCDHAC2Q9Y5I4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC30.48■■■□□ 2.47
PCDHAC2Q9Y5I4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
PCDHAC2Q9Y5I4 ECEL1P2-201ENST00000461596 1295 ntBASIC30.47■■■□□ 2.47
PCDHAC2Q9Y5I4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PCDHAC2Q9Y5I4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC30.47■■■□□ 2.47
PCDHAC2Q9Y5I4 AC100797.4-201ENST00000631653 1827 ntBASIC30.47■■■□□ 2.47
PCDHAC2Q9Y5I4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms