Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MMP25Q9NPA2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
MMP25Q9NPA2 AC008813.1-201ENST00000536597 885 ntBASIC23.75■■□□□ 1.39
MMP25Q9NPA2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MMP25Q9NPA2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.74■■□□□ 1.39
MMP25Q9NPA2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MMP25Q9NPA2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MMP25Q9NPA2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MMP25Q9NPA2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.74■■□□□ 1.39
MMP25Q9NPA2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
MMP25Q9NPA2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MMP25Q9NPA2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MMP25Q9NPA2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
MMP25Q9NPA2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.73■■□□□ 1.39
MMP25Q9NPA2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
MMP25Q9NPA2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
MMP25Q9NPA2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MMP25Q9NPA2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MMP25Q9NPA2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MMP25Q9NPA2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MMP25Q9NPA2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MMP25Q9NPA2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MMP25Q9NPA2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MMP25Q9NPA2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
MMP25Q9NPA2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
MMP25Q9NPA2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
MMP25Q9NPA2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
MMP25Q9NPA2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.7■■□□□ 1.38
MMP25Q9NPA2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.7■■□□□ 1.38
MMP25Q9NPA2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.7■■□□□ 1.38
MMP25Q9NPA2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MMP25Q9NPA2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
MMP25Q9NPA2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.68■■□□□ 1.38
MMP25Q9NPA2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.68■■□□□ 1.38
MMP25Q9NPA2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
MMP25Q9NPA2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MMP25Q9NPA2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.67■■□□□ 1.38
MMP25Q9NPA2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.67■■□□□ 1.38
MMP25Q9NPA2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MMP25Q9NPA2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
MMP25Q9NPA2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.66■■□□□ 1.38
MMP25Q9NPA2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
MMP25Q9NPA2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.65■■□□□ 1.38
MMP25Q9NPA2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.65■■□□□ 1.38
MMP25Q9NPA2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.65■■□□□ 1.38
MMP25Q9NPA2 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.64■■□□□ 1.37
MMP25Q9NPA2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.64■■□□□ 1.37
MMP25Q9NPA2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.64■■□□□ 1.37
MMP25Q9NPA2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
MMP25Q9NPA2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
MMP25Q9NPA2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
MMP25Q9NPA2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
MMP25Q9NPA2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MMP25Q9NPA2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MMP25Q9NPA2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
MMP25Q9NPA2 HSD17B1P1-201ENST00000590052 955 ntBASIC23.63■■□□□ 1.37
MMP25Q9NPA2 AL139393.2-201ENST00000608721 2025 ntBASIC23.63■■□□□ 1.37
MMP25Q9NPA2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
MMP25Q9NPA2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MMP25Q9NPA2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MMP25Q9NPA2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
MMP25Q9NPA2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.62■■□□□ 1.37
MMP25Q9NPA2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
MMP25Q9NPA2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.61■■□□□ 1.37
MMP25Q9NPA2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.61■■□□□ 1.37
MMP25Q9NPA2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
MMP25Q9NPA2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MMP25Q9NPA2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
MMP25Q9NPA2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.6■■□□□ 1.37
MMP25Q9NPA2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.59■■□□□ 1.37
MMP25Q9NPA2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.59■■□□□ 1.37
MMP25Q9NPA2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.59■■□□□ 1.37
MMP25Q9NPA2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
MMP25Q9NPA2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MMP25Q9NPA2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
MMP25Q9NPA2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
MMP25Q9NPA2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
MMP25Q9NPA2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.58■■□□□ 1.37
MMP25Q9NPA2 AC148477.6-201ENST00000623746 465 ntBASIC23.58■■□□□ 1.37
MMP25Q9NPA2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
MMP25Q9NPA2 AC100797.4-201ENST00000631653 1827 ntBASIC23.58■■□□□ 1.37
MMP25Q9NPA2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MMP25Q9NPA2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MMP25Q9NPA2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.57■■□□□ 1.36
MMP25Q9NPA2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
MMP25Q9NPA2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
MMP25Q9NPA2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
MMP25Q9NPA2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
MMP25Q9NPA2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
MMP25Q9NPA2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
MMP25Q9NPA2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.55■■□□□ 1.36
MMP25Q9NPA2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
MMP25Q9NPA2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
MMP25Q9NPA2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.55■■□□□ 1.36
MMP25Q9NPA2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
MMP25Q9NPA2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
MMP25Q9NPA2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
MMP25Q9NPA2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MMP25Q9NPA2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.53■■□□□ 1.36
MMP25Q9NPA2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms