Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ATP13A1Q9HD20 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ATP13A1Q9HD20 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ATP13A1Q9HD20 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.14■■□□□ 1.78
ATP13A1Q9HD20 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.14■■□□□ 1.78
ATP13A1Q9HD20 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.13■■□□□ 1.77
ATP13A1Q9HD20 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.13■■□□□ 1.77
ATP13A1Q9HD20 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.13■■□□□ 1.77
ATP13A1Q9HD20 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.13■■□□□ 1.77
ATP13A1Q9HD20 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
ATP13A1Q9HD20 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.12■■□□□ 1.77
ATP13A1Q9HD20 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
ATP13A1Q9HD20 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ATP13A1Q9HD20 AC110285.7-201ENST00000624417 1536 ntBASIC26.11■■□□□ 1.77
ATP13A1Q9HD20 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ATP13A1Q9HD20 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.1■■□□□ 1.77
ATP13A1Q9HD20 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.09■■□□□ 1.77
ATP13A1Q9HD20 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ATP13A1Q9HD20 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ATP13A1Q9HD20 MIR639-201ENST00000384974 98 ntBASIC26.09■■□□□ 1.77
ATP13A1Q9HD20 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.09■■□□□ 1.77
ATP13A1Q9HD20 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ATP13A1Q9HD20 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ATP13A1Q9HD20 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ATP13A1Q9HD20 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
ATP13A1Q9HD20 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
ATP13A1Q9HD20 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
ATP13A1Q9HD20 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ATP13A1Q9HD20 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
ATP13A1Q9HD20 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ATP13A1Q9HD20 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ATP13A1Q9HD20 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
ATP13A1Q9HD20 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
ATP13A1Q9HD20 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.04■■□□□ 1.76
ATP13A1Q9HD20 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
ATP13A1Q9HD20 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.03■■□□□ 1.76
ATP13A1Q9HD20 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
ATP13A1Q9HD20 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ATP13A1Q9HD20 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
ATP13A1Q9HD20 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.02■■□□□ 1.76
ATP13A1Q9HD20 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.02■■□□□ 1.76
ATP13A1Q9HD20 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
ATP13A1Q9HD20 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
ATP13A1Q9HD20 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ATP13A1Q9HD20 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
ATP13A1Q9HD20 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
ATP13A1Q9HD20 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
ATP13A1Q9HD20 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26■■□□□ 1.75
ATP13A1Q9HD20 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ATP13A1Q9HD20 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
ATP13A1Q9HD20 DRD5P2-201ENST00000421395 2012 ntBASIC25.99■■□□□ 1.75
ATP13A1Q9HD20 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ATP13A1Q9HD20 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.99■■□□□ 1.75
ATP13A1Q9HD20 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ATP13A1Q9HD20 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ATP13A1Q9HD20 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ATP13A1Q9HD20 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ATP13A1Q9HD20 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ATP13A1Q9HD20 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
ATP13A1Q9HD20 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ATP13A1Q9HD20 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ATP13A1Q9HD20 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ATP13A1Q9HD20 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ATP13A1Q9HD20 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ATP13A1Q9HD20 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.97■■□□□ 1.75
ATP13A1Q9HD20 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ATP13A1Q9HD20 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ATP13A1Q9HD20 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
ATP13A1Q9HD20 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
ATP13A1Q9HD20 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ATP13A1Q9HD20 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ATP13A1Q9HD20 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
ATP13A1Q9HD20 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
ATP13A1Q9HD20 MIR4449-201ENST00000578365 66 ntBASIC25.95■■□□□ 1.74
ATP13A1Q9HD20 AC008813.1-201ENST00000536597 885 ntBASIC25.94■■□□□ 1.74
ATP13A1Q9HD20 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.94■■□□□ 1.74
ATP13A1Q9HD20 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ATP13A1Q9HD20 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
ATP13A1Q9HD20 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ATP13A1Q9HD20 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.93■■□□□ 1.74
ATP13A1Q9HD20 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ATP13A1Q9HD20 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.92■■□□□ 1.74
ATP13A1Q9HD20 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ATP13A1Q9HD20 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ATP13A1Q9HD20 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
ATP13A1Q9HD20 AC142086.6-201ENST00000621154 1765 ntBASIC25.91■■□□□ 1.74
ATP13A1Q9HD20 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ATP13A1Q9HD20 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ATP13A1Q9HD20 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ATP13A1Q9HD20 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.9■■□□□ 1.74
ATP13A1Q9HD20 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ATP13A1Q9HD20 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
ATP13A1Q9HD20 AP002414.2-202ENST00000590929 1450 ntBASIC25.89■■□□□ 1.73
ATP13A1Q9HD20 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
ATP13A1Q9HD20 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
ATP13A1Q9HD20 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
ATP13A1Q9HD20 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.88■■□□□ 1.73
ATP13A1Q9HD20 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.88■■□□□ 1.73
ATP13A1Q9HD20 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.88■■□□□ 1.73
ATP13A1Q9HD20 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 1099.9 ms