Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 CR559946.2-201ENST00000623684 991 ntBASIC21.79■■□□□ 1.08
MSL2Q9HCI7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MSL2Q9HCI7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MSL2Q9HCI7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MSL2Q9HCI7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.79■■□□□ 1.08
MSL2Q9HCI7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MSL2Q9HCI7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MSL2Q9HCI7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
MSL2Q9HCI7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.78■■□□□ 1.08
MSL2Q9HCI7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.78■■□□□ 1.08
MSL2Q9HCI7 MIR3648-2-201ENST00000581792 180 ntBASIC21.78■■□□□ 1.08
MSL2Q9HCI7 MIR3648-1-201ENST00000615959 180 ntBASIC21.78■■□□□ 1.08
MSL2Q9HCI7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.78■■□□□ 1.08
MSL2Q9HCI7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.78■■□□□ 1.08
MSL2Q9HCI7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MSL2Q9HCI7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.77■■□□□ 1.08
MSL2Q9HCI7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MSL2Q9HCI7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
MSL2Q9HCI7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.76■■□□□ 1.07
MSL2Q9HCI7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MSL2Q9HCI7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.76■■□□□ 1.07
MSL2Q9HCI7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.76■■□□□ 1.07
MSL2Q9HCI7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
MSL2Q9HCI7 AC110285.7-201ENST00000624417 1536 ntBASIC21.75■■□□□ 1.07
MSL2Q9HCI7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
MSL2Q9HCI7 AC016575.1-201ENST00000607026 382 ntBASIC21.75■■□□□ 1.07
MSL2Q9HCI7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSL2Q9HCI7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSL2Q9HCI7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSL2Q9HCI7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSL2Q9HCI7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSL2Q9HCI7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.74■■□□□ 1.07
MSL2Q9HCI7 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.74■■□□□ 1.07
MSL2Q9HCI7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.74■■□□□ 1.07
MSL2Q9HCI7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSL2Q9HCI7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.74■■□□□ 1.07
MSL2Q9HCI7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSL2Q9HCI7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSL2Q9HCI7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSL2Q9HCI7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSL2Q9HCI7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSL2Q9HCI7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
MSL2Q9HCI7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSL2Q9HCI7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MSL2Q9HCI7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MSL2Q9HCI7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSL2Q9HCI7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSL2Q9HCI7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSL2Q9HCI7 DRD5P2-201ENST00000421395 2012 ntBASIC21.7■■□□□ 1.06
MSL2Q9HCI7 HLA-V-202ENST00000446817 847 ntBASIC21.69■■□□□ 1.06
MSL2Q9HCI7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.68■■□□□ 1.06
MSL2Q9HCI7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.68■■□□□ 1.06
MSL2Q9HCI7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.68■■□□□ 1.06
MSL2Q9HCI7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MSL2Q9HCI7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MSL2Q9HCI7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.68■■□□□ 1.06
MSL2Q9HCI7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MSL2Q9HCI7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
MSL2Q9HCI7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
MSL2Q9HCI7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MSL2Q9HCI7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MSL2Q9HCI7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.67■■□□□ 1.06
MSL2Q9HCI7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MSL2Q9HCI7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
MSL2Q9HCI7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MSL2Q9HCI7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MSL2Q9HCI7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
MSL2Q9HCI7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.65■■□□□ 1.06
MSL2Q9HCI7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
MSL2Q9HCI7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MSL2Q9HCI7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MSL2Q9HCI7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
MSL2Q9HCI7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MSL2Q9HCI7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
MSL2Q9HCI7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSL2Q9HCI7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.63■■□□□ 1.05
MSL2Q9HCI7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.63■■□□□ 1.05
MSL2Q9HCI7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.63■■□□□ 1.05
MSL2Q9HCI7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.63■■□□□ 1.05
MSL2Q9HCI7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSL2Q9HCI7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MSL2Q9HCI7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSL2Q9HCI7 MIR639-201ENST00000384974 98 ntBASIC21.62■■□□□ 1.05
MSL2Q9HCI7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
MSL2Q9HCI7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
MSL2Q9HCI7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSL2Q9HCI7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MSL2Q9HCI7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSL2Q9HCI7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSL2Q9HCI7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
MSL2Q9HCI7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSL2Q9HCI7 AP002414.2-202ENST00000590929 1450 ntBASIC21.61■■□□□ 1.05
MSL2Q9HCI7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSL2Q9HCI7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MSL2Q9HCI7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.61■■□□□ 1.05
MSL2Q9HCI7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MSL2Q9HCI7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSL2Q9HCI7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSL2Q9HCI7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MSL2Q9HCI7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms