Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CPNE5Q9HCH3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CPNE5Q9HCH3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CPNE5Q9HCH3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
CPNE5Q9HCH3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CPNE5Q9HCH3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CPNE5Q9HCH3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CPNE5Q9HCH3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
CPNE5Q9HCH3 U85056.1-201ENST00000616429 682 ntBASIC24.37■■□□□ 1.49
CPNE5Q9HCH3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CPNE5Q9HCH3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CPNE5Q9HCH3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CPNE5Q9HCH3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CPNE5Q9HCH3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.36■■□□□ 1.49
CPNE5Q9HCH3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.36■■□□□ 1.49
CPNE5Q9HCH3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CPNE5Q9HCH3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CPNE5Q9HCH3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CPNE5Q9HCH3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPNE5Q9HCH3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CPNE5Q9HCH3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPNE5Q9HCH3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPNE5Q9HCH3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPNE5Q9HCH3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.34■■□□□ 1.49
CPNE5Q9HCH3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.34■■□□□ 1.49
CPNE5Q9HCH3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CPNE5Q9HCH3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CPNE5Q9HCH3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CPNE5Q9HCH3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CPNE5Q9HCH3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CPNE5Q9HCH3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.31■■□□□ 1.48
CPNE5Q9HCH3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPNE5Q9HCH3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.3■■□□□ 1.48
CPNE5Q9HCH3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.3■■□□□ 1.48
CPNE5Q9HCH3 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.3■■□□□ 1.48
CPNE5Q9HCH3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CPNE5Q9HCH3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.29■■□□□ 1.48
CPNE5Q9HCH3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CPNE5Q9HCH3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CPNE5Q9HCH3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CPNE5Q9HCH3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.28■■□□□ 1.48
CPNE5Q9HCH3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.28■■□□□ 1.48
CPNE5Q9HCH3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CPNE5Q9HCH3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.28■■□□□ 1.48
CPNE5Q9HCH3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CPNE5Q9HCH3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CPNE5Q9HCH3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CPNE5Q9HCH3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.27■■□□□ 1.48
CPNE5Q9HCH3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CPNE5Q9HCH3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CPNE5Q9HCH3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.26■■□□□ 1.47
CPNE5Q9HCH3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CPNE5Q9HCH3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CPNE5Q9HCH3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CPNE5Q9HCH3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CPNE5Q9HCH3 TSPY13P-201ENST00000338964 914 ntBASIC24.25■■□□□ 1.47
CPNE5Q9HCH3 RARRES2P1-201ENST00000474487 481 ntBASIC24.25■■□□□ 1.47
CPNE5Q9HCH3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CPNE5Q9HCH3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CPNE5Q9HCH3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CPNE5Q9HCH3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.24■■□□□ 1.47
CPNE5Q9HCH3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.23■■□□□ 1.47
CPNE5Q9HCH3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CPNE5Q9HCH3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
CPNE5Q9HCH3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CPNE5Q9HCH3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.22■■□□□ 1.47
CPNE5Q9HCH3 AC004987.1-201ENST00000428627 508 ntBASIC24.22■■□□□ 1.47
CPNE5Q9HCH3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CPNE5Q9HCH3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CPNE5Q9HCH3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.22■■□□□ 1.47
CPNE5Q9HCH3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
CPNE5Q9HCH3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CPNE5Q9HCH3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CPNE5Q9HCH3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CPNE5Q9HCH3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CPNE5Q9HCH3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CPNE5Q9HCH3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CPNE5Q9HCH3 KRT18P60-201ENST00000312876 1297 ntBASIC24.2■■□□□ 1.46
CPNE5Q9HCH3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CPNE5Q9HCH3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
CPNE5Q9HCH3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.19■■□□□ 1.46
CPNE5Q9HCH3 ATP5G2P3-201ENST00000429083 425 ntBASIC24.19■■□□□ 1.46
CPNE5Q9HCH3 AC135731.1-201ENST00000569415 2548 ntBASIC24.19■■□□□ 1.46
CPNE5Q9HCH3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.18■■□□□ 1.46
CPNE5Q9HCH3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.18■■□□□ 1.46
CPNE5Q9HCH3 AC060814.1-201ENST00000554326 538 ntBASIC24.18■■□□□ 1.46
CPNE5Q9HCH3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CPNE5Q9HCH3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CPNE5Q9HCH3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.17■■□□□ 1.46
CPNE5Q9HCH3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CPNE5Q9HCH3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.17■■□□□ 1.46
CPNE5Q9HCH3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.17■■□□□ 1.46
CPNE5Q9HCH3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.17■■□□□ 1.46
CPNE5Q9HCH3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CPNE5Q9HCH3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CPNE5Q9HCH3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CPNE5Q9HCH3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.16■■□□□ 1.46
CPNE5Q9HCH3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CPNE5Q9HCH3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CPNE5Q9HCH3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms