Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
ATP6V0A4Q9HBG4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.33■■■□□ 2.12
ATP6V0A4Q9HBG4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ATP6V0A4Q9HBG4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.32■■■□□ 2.12
ATP6V0A4Q9HBG4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ATP6V0A4Q9HBG4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.31■■■□□ 2.12
ATP6V0A4Q9HBG4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
ATP6V0A4Q9HBG4 ABCB10P3-201ENST00000561950 2166 ntBASIC28.3■■■□□ 2.12
ATP6V0A4Q9HBG4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.29■■■□□ 2.12
ATP6V0A4Q9HBG4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.28■■■□□ 2.12
ATP6V0A4Q9HBG4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ATP6V0A4Q9HBG4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.28■■■□□ 2.12
ATP6V0A4Q9HBG4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ATP6V0A4Q9HBG4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.27■■■□□ 2.12
ATP6V0A4Q9HBG4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.27■■■□□ 2.12
ATP6V0A4Q9HBG4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ATP6V0A4Q9HBG4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.27■■■□□ 2.12
ATP6V0A4Q9HBG4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ATP6V0A4Q9HBG4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
ATP6V0A4Q9HBG4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
ATP6V0A4Q9HBG4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
ATP6V0A4Q9HBG4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ATP6V0A4Q9HBG4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
ATP6V0A4Q9HBG4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
ATP6V0A4Q9HBG4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ATP6V0A4Q9HBG4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ATP6V0A4Q9HBG4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ATP6V0A4Q9HBG4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ATP6V0A4Q9HBG4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ATP6V0A4Q9HBG4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ATP6V0A4Q9HBG4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
ATP6V0A4Q9HBG4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
ATP6V0A4Q9HBG4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
ATP6V0A4Q9HBG4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
ATP6V0A4Q9HBG4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ATP6V0A4Q9HBG4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ATP6V0A4Q9HBG4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
ATP6V0A4Q9HBG4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
ATP6V0A4Q9HBG4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.24■■■□□ 2.11
ATP6V0A4Q9HBG4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ATP6V0A4Q9HBG4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
ATP6V0A4Q9HBG4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.23■■■□□ 2.11
ATP6V0A4Q9HBG4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.23■■■□□ 2.11
ATP6V0A4Q9HBG4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.23■■■□□ 2.11
ATP6V0A4Q9HBG4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
ATP6V0A4Q9HBG4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ATP6V0A4Q9HBG4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ATP6V0A4Q9HBG4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.22■■■□□ 2.11
ATP6V0A4Q9HBG4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.22■■■□□ 2.11
ATP6V0A4Q9HBG4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ATP6V0A4Q9HBG4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.22■■■□□ 2.11
ATP6V0A4Q9HBG4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ATP6V0A4Q9HBG4 AC008813.1-201ENST00000536597 885 ntBASIC28.21■■■□□ 2.11
ATP6V0A4Q9HBG4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.21■■■□□ 2.11
ATP6V0A4Q9HBG4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ATP6V0A4Q9HBG4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.2■■■□□ 2.1
ATP6V0A4Q9HBG4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.2■■■□□ 2.1
ATP6V0A4Q9HBG4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.1
ATP6V0A4Q9HBG4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
ATP6V0A4Q9HBG4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
ATP6V0A4Q9HBG4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ATP6V0A4Q9HBG4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.19■■■□□ 2.1
ATP6V0A4Q9HBG4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
ATP6V0A4Q9HBG4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
ATP6V0A4Q9HBG4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
ATP6V0A4Q9HBG4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ATP6V0A4Q9HBG4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
ATP6V0A4Q9HBG4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ATP6V0A4Q9HBG4 AC139426.1-201ENST00000568218 2529 ntBASIC28.18■■■□□ 2.1
ATP6V0A4Q9HBG4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ATP6V0A4Q9HBG4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.17■■■□□ 2.1
ATP6V0A4Q9HBG4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.17■■■□□ 2.1
ATP6V0A4Q9HBG4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP6V0A4Q9HBG4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.16■■■□□ 2.1
ATP6V0A4Q9HBG4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP6V0A4Q9HBG4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP6V0A4Q9HBG4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
ATP6V0A4Q9HBG4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
ATP6V0A4Q9HBG4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ATP6V0A4Q9HBG4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
ATP6V0A4Q9HBG4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.14■■■□□ 2.1
ATP6V0A4Q9HBG4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.13■■■□□ 2.09
ATP6V0A4Q9HBG4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
ATP6V0A4Q9HBG4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ATP6V0A4Q9HBG4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
ATP6V0A4Q9HBG4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ATP6V0A4Q9HBG4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.12■■■□□ 2.09
ATP6V0A4Q9HBG4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ATP6V0A4Q9HBG4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ATP6V0A4Q9HBG4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.11■■■□□ 2.09
ATP6V0A4Q9HBG4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ATP6V0A4Q9HBG4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
ATP6V0A4Q9HBG4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
ATP6V0A4Q9HBG4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ATP6V0A4Q9HBG4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
ATP6V0A4Q9HBG4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.09■■■□□ 2.09
ATP6V0A4Q9HBG4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ATP6V0A4Q9HBG4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.07■■■□□ 2.08
ATP6V0A4Q9HBG4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.07■■■□□ 2.08
ATP6V0A4Q9HBG4 GPX1-201ENST00000419349 1106 ntBASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms