Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC32.06■■■□□ 2.72
CHMP4BQ9H444 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
CHMP4BQ9H444 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CHMP4BQ9H444 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
CHMP4BQ9H444 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CHMP4BQ9H444 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CHMP4BQ9H444 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CHMP4BQ9H444 LINC01003-201ENST00000564834 1764 ntBASIC32.03■■■□□ 2.72
CHMP4BQ9H444 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC32.03■■■□□ 2.72
CHMP4BQ9H444 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC32.02■■■□□ 2.72
CHMP4BQ9H444 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CHMP4BQ9H444 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.02■■■□□ 2.72
CHMP4BQ9H444 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHMP4BQ9H444 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.02■■■□□ 2.72
CHMP4BQ9H444 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CHMP4BQ9H444 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
CHMP4BQ9H444 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CHMP4BQ9H444 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CHMP4BQ9H444 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC32.01■■■□□ 2.71
CHMP4BQ9H444 SHF-208ENST00000560734 1731 ntTSL 3 BASIC32■■■□□ 2.71
CHMP4BQ9H444 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
CHMP4BQ9H444 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CHMP4BQ9H444 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.99■■■□□ 2.71
CHMP4BQ9H444 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.99■■■□□ 2.71
CHMP4BQ9H444 AC018358.1-201ENST00000631079 1402 ntBASIC31.99■■■□□ 2.71
CHMP4BQ9H444 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CHMP4BQ9H444 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CHMP4BQ9H444 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CHMP4BQ9H444 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CHMP4BQ9H444 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CHMP4BQ9H444 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CHMP4BQ9H444 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CHMP4BQ9H444 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.96■■■□□ 2.71
CHMP4BQ9H444 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.96■■■□□ 2.71
CHMP4BQ9H444 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CHMP4BQ9H444 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
CHMP4BQ9H444 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
CHMP4BQ9H444 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
CHMP4BQ9H444 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.94■■■□□ 2.7
CHMP4BQ9H444 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.94■■■□□ 2.7
CHMP4BQ9H444 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.94■■■□□ 2.7
CHMP4BQ9H444 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CHMP4BQ9H444 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
CHMP4BQ9H444 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CHMP4BQ9H444 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.93■■■□□ 2.7
CHMP4BQ9H444 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
CHMP4BQ9H444 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
CHMP4BQ9H444 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
CHMP4BQ9H444 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
CHMP4BQ9H444 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CHMP4BQ9H444 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
CHMP4BQ9H444 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CHMP4BQ9H444 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CHMP4BQ9H444 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
CHMP4BQ9H444 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CHMP4BQ9H444 AC110285.7-201ENST00000624417 1536 ntBASIC31.89■■■□□ 2.7
CHMP4BQ9H444 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
CHMP4BQ9H444 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHMP4BQ9H444 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHMP4BQ9H444 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.87■■■□□ 2.69
CHMP4BQ9H444 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.87■■■□□ 2.69
CHMP4BQ9H444 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.87■■■□□ 2.69
CHMP4BQ9H444 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
CHMP4BQ9H444 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CHMP4BQ9H444 LINC01971-201ENST00000617888 1048 ntBASIC31.86■■■□□ 2.69
CHMP4BQ9H444 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
CHMP4BQ9H444 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.85■■■□□ 2.69
CHMP4BQ9H444 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHMP4BQ9H444 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
CHMP4BQ9H444 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
CHMP4BQ9H444 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.84■■■□□ 2.69
CHMP4BQ9H444 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.84■■■□□ 2.69
CHMP4BQ9H444 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
CHMP4BQ9H444 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.83■■■□□ 2.69
CHMP4BQ9H444 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHMP4BQ9H444 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHMP4BQ9H444 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHMP4BQ9H444 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CHMP4BQ9H444 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHMP4BQ9H444 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.82■■■□□ 2.68
CHMP4BQ9H444 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.82■■■□□ 2.68
CHMP4BQ9H444 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
CHMP4BQ9H444 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHMP4BQ9H444 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.81■■■□□ 2.68
CHMP4BQ9H444 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CHMP4BQ9H444 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CHMP4BQ9H444 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
CHMP4BQ9H444 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CHMP4BQ9H444 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
CHMP4BQ9H444 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
CHMP4BQ9H444 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CHMP4BQ9H444 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHMP4BQ9H444 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
CHMP4BQ9H444 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CHMP4BQ9H444 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHMP4BQ9H444 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHMP4BQ9H444 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHMP4BQ9H444 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
CHMP4BQ9H444 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.78■■■□□ 2.68
CHMP4BQ9H444 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms