Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
LSG1Q9H089 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
LSG1Q9H089 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
LSG1Q9H089 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
LSG1Q9H089 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
LSG1Q9H089 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
LSG1Q9H089 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
LSG1Q9H089 LINC01003-201ENST00000564834 1764 ntBASIC30.53■■■□□ 2.48
LSG1Q9H089 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
LSG1Q9H089 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
LSG1Q9H089 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
LSG1Q9H089 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
LSG1Q9H089 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.48
LSG1Q9H089 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.5■■■□□ 2.47
LSG1Q9H089 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.5■■■□□ 2.47
LSG1Q9H089 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.5■■■□□ 2.47
LSG1Q9H089 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
LSG1Q9H089 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
LSG1Q9H089 DUX4L29-201ENST00000425409 679 ntBASIC30.5■■■□□ 2.47
LSG1Q9H089 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.5■■■□□ 2.47
LSG1Q9H089 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.5■■■□□ 2.47
LSG1Q9H089 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.5■■■□□ 2.47
LSG1Q9H089 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
LSG1Q9H089 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
LSG1Q9H089 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
LSG1Q9H089 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
LSG1Q9H089 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
LSG1Q9H089 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
LSG1Q9H089 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
LSG1Q9H089 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
LSG1Q9H089 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
LSG1Q9H089 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.47■■■□□ 2.47
LSG1Q9H089 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.47■■■□□ 2.47
LSG1Q9H089 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
LSG1Q9H089 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
LSG1Q9H089 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
LSG1Q9H089 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
LSG1Q9H089 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
LSG1Q9H089 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
LSG1Q9H089 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.43■■■□□ 2.46
LSG1Q9H089 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
LSG1Q9H089 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
LSG1Q9H089 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
LSG1Q9H089 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
LSG1Q9H089 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
LSG1Q9H089 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
LSG1Q9H089 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
LSG1Q9H089 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
LSG1Q9H089 AC018358.1-201ENST00000631079 1402 ntBASIC30.39■■■□□ 2.46
LSG1Q9H089 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.39■■■□□ 2.46
LSG1Q9H089 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
LSG1Q9H089 AL121749.1-202ENST00000609313 2153 ntBASIC30.39■■■□□ 2.46
LSG1Q9H089 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
LSG1Q9H089 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
LSG1Q9H089 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
LSG1Q9H089 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
LSG1Q9H089 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.36■■■□□ 2.45
LSG1Q9H089 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.36■■■□□ 2.45
LSG1Q9H089 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
LSG1Q9H089 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
LSG1Q9H089 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
LSG1Q9H089 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
LSG1Q9H089 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.35■■■□□ 2.45
LSG1Q9H089 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
LSG1Q9H089 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.34■■■□□ 2.45
LSG1Q9H089 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
LSG1Q9H089 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
LSG1Q9H089 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.34■■■□□ 2.45
LSG1Q9H089 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.34■■■□□ 2.45
LSG1Q9H089 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
LSG1Q9H089 AC110285.7-201ENST00000624417 1536 ntBASIC30.32■■■□□ 2.44
LSG1Q9H089 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.32■■■□□ 2.44
LSG1Q9H089 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.32■■■□□ 2.44
LSG1Q9H089 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.31■■■□□ 2.44
LSG1Q9H089 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.31■■■□□ 2.44
LSG1Q9H089 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
LSG1Q9H089 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
LSG1Q9H089 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.3■■■□□ 2.44
LSG1Q9H089 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
LSG1Q9H089 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
LSG1Q9H089 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
LSG1Q9H089 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
LSG1Q9H089 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
LSG1Q9H089 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
LSG1Q9H089 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.28■■■□□ 2.44
LSG1Q9H089 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
LSG1Q9H089 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
LSG1Q9H089 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
LSG1Q9H089 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
LSG1Q9H089 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
LSG1Q9H089 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
LSG1Q9H089 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
LSG1Q9H089 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
LSG1Q9H089 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.43
LSG1Q9H089 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.26■■■□□ 2.43
LSG1Q9H089 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
LSG1Q9H089 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
LSG1Q9H089 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
LSG1Q9H089 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
LSG1Q9H089 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms