Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC091060.1-201ENST00000623524 1766 ntBASIC12.92□□□□□ -0.34
KRTAP3-1Q9BYR8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KRTAP3-1Q9BYR8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KRTAP3-1Q9BYR8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KRTAP3-1Q9BYR8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KRTAP3-1Q9BYR8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KRTAP3-1Q9BYR8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KRTAP3-1Q9BYR8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC12.91□□□□□ -0.34
KRTAP3-1Q9BYR8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
KRTAP3-1Q9BYR8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC12.91□□□□□ -0.34
KRTAP3-1Q9BYR8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KRTAP3-1Q9BYR8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KRTAP3-1Q9BYR8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
KRTAP3-1Q9BYR8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC12.91□□□□□ -0.34
KRTAP3-1Q9BYR8 AP002414.2-202ENST00000590929 1450 ntBASIC12.91□□□□□ -0.34
KRTAP3-1Q9BYR8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
KRTAP3-1Q9BYR8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KRTAP3-1Q9BYR8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
KRTAP3-1Q9BYR8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KRTAP3-1Q9BYR8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
KRTAP3-1Q9BYR8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC12.89□□□□□ -0.35
KRTAP3-1Q9BYR8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC12.89□□□□□ -0.35
KRTAP3-1Q9BYR8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KRTAP3-1Q9BYR8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP3-1Q9BYR8 SETD8P1-201ENST00000623146 1180 ntBASIC12.88□□□□□ -0.35
KRTAP3-1Q9BYR8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP3-1Q9BYR8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
KRTAP3-1Q9BYR8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KRTAP3-1Q9BYR8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-1Q9BYR8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-1Q9BYR8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-1Q9BYR8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
KRTAP3-1Q9BYR8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KRTAP3-1Q9BYR8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KRTAP3-1Q9BYR8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC12.86□□□□□ -0.35
KRTAP3-1Q9BYR8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC12.86□□□□□ -0.35
KRTAP3-1Q9BYR8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC12.86□□□□□ -0.35
KRTAP3-1Q9BYR8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
KRTAP3-1Q9BYR8 RARRES2P7-201ENST00000567349 469 ntBASIC12.85□□□□□ -0.35
KRTAP3-1Q9BYR8 CAHM-201ENST00000604200 896 ntBASIC12.85□□□□□ -0.35
KRTAP3-1Q9BYR8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP3-1Q9BYR8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC12.85□□□□□ -0.35
KRTAP3-1Q9BYR8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP3-1Q9BYR8 AL391121.1-201ENST00000607967 1349 ntBASIC12.85□□□□□ -0.35
KRTAP3-1Q9BYR8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
KRTAP3-1Q9BYR8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC12.85□□□□□ -0.35
KRTAP3-1Q9BYR8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
KRTAP3-1Q9BYR8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
KRTAP3-1Q9BYR8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-1Q9BYR8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-1Q9BYR8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC12.84□□□□□ -0.35
KRTAP3-1Q9BYR8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-1Q9BYR8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-1Q9BYR8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-1Q9BYR8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
KRTAP3-1Q9BYR8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-1Q9BYR8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-1Q9BYR8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
KRTAP3-1Q9BYR8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-1Q9BYR8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KRTAP3-1Q9BYR8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC12.84□□□□□ -0.35
KRTAP3-1Q9BYR8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
KRTAP3-1Q9BYR8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC12.83□□□□□ -0.35
KRTAP3-1Q9BYR8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP3-1Q9BYR8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC12.83□□□□□ -0.36
KRTAP3-1Q9BYR8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP3-1Q9BYR8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP3-1Q9BYR8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC12.83□□□□□ -0.36
KRTAP3-1Q9BYR8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KRTAP3-1Q9BYR8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC12.82□□□□□ -0.36
KRTAP3-1Q9BYR8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
KRTAP3-1Q9BYR8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
KRTAP3-1Q9BYR8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC12.82□□□□□ -0.36
KRTAP3-1Q9BYR8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-1Q9BYR8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-1Q9BYR8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-1Q9BYR8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-1Q9BYR8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KRTAP3-1Q9BYR8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-1Q9BYR8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC12.81□□□□□ -0.36
KRTAP3-1Q9BYR8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC12.81□□□□□ -0.36
KRTAP3-1Q9BYR8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-1Q9BYR8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-1Q9BYR8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC12.81□□□□□ -0.36
KRTAP3-1Q9BYR8 AC020928.2-201ENST00000588717 2197 ntBASIC12.81□□□□□ -0.36
KRTAP3-1Q9BYR8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-1Q9BYR8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
KRTAP3-1Q9BYR8 AC018358.1-201ENST00000631079 1402 ntBASIC12.8□□□□□ -0.36
KRTAP3-1Q9BYR8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-1Q9BYR8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-1Q9BYR8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-1Q9BYR8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-1Q9BYR8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-1Q9BYR8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
KRTAP3-1Q9BYR8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KRTAP3-1Q9BYR8 AC145676.1-201ENST00000514988 2004 ntBASIC12.79□□□□□ -0.36
KRTAP3-1Q9BYR8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP3-1Q9BYR8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
KRTAP3-1Q9BYR8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
KRTAP3-1Q9BYR8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms