Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC85AQ96PX6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
CCDC85AQ96PX6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.85■■■□□ 2.69
CCDC85AQ96PX6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC85AQ96PX6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.84■■■□□ 2.69
CCDC85AQ96PX6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.84■■■□□ 2.69
CCDC85AQ96PX6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.84■■■□□ 2.69
CCDC85AQ96PX6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC85AQ96PX6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
CCDC85AQ96PX6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.84■■■□□ 2.69
CCDC85AQ96PX6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC85AQ96PX6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.83■■■□□ 2.69
CCDC85AQ96PX6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC85AQ96PX6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC85AQ96PX6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC85AQ96PX6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.82■■■□□ 2.68
CCDC85AQ96PX6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.82■■■□□ 2.68
CCDC85AQ96PX6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
CCDC85AQ96PX6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC85AQ96PX6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.81■■■□□ 2.68
CCDC85AQ96PX6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
CCDC85AQ96PX6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC85AQ96PX6 RNF126P1-201ENST00000567452 1320 ntBASIC31.8■■■□□ 2.68
CCDC85AQ96PX6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC85AQ96PX6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.8■■■□□ 2.68
CCDC85AQ96PX6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC85AQ96PX6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC85AQ96PX6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC85AQ96PX6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC85AQ96PX6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC85AQ96PX6 AC100797.4-201ENST00000631653 1827 ntBASIC31.78■■■□□ 2.68
CCDC85AQ96PX6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.78■■■□□ 2.68
CCDC85AQ96PX6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC85AQ96PX6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
CCDC85AQ96PX6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC85AQ96PX6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.75■■■□□ 2.67
CCDC85AQ96PX6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.75■■■□□ 2.67
CCDC85AQ96PX6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
CCDC85AQ96PX6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC85AQ96PX6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC85AQ96PX6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC85AQ96PX6 MIR219A2-201ENST00000608502 1504 ntBASIC31.75■■■□□ 2.67
CCDC85AQ96PX6 ABCB10P1-201ENST00000614297 2181 ntBASIC31.74■■■□□ 2.67
CCDC85AQ96PX6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.74■■■□□ 2.67
CCDC85AQ96PX6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.74■■■□□ 2.67
CCDC85AQ96PX6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC85AQ96PX6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC85AQ96PX6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.73■■■□□ 2.67
CCDC85AQ96PX6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC85AQ96PX6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.73■■■□□ 2.67
CCDC85AQ96PX6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC85AQ96PX6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
CCDC85AQ96PX6 ABHD17AP5-201ENST00000580133 923 ntBASIC31.72■■■□□ 2.67
CCDC85AQ96PX6 AC148477.6-201ENST00000623746 465 ntBASIC31.72■■■□□ 2.67
CCDC85AQ96PX6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC85AQ96PX6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.71■■■□□ 2.67
CCDC85AQ96PX6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
CCDC85AQ96PX6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CCDC85AQ96PX6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CCDC85AQ96PX6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CCDC85AQ96PX6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.7■■■□□ 2.66
CCDC85AQ96PX6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CCDC85AQ96PX6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
CCDC85AQ96PX6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
CCDC85AQ96PX6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC85AQ96PX6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC85AQ96PX6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.66■■■□□ 2.66
CCDC85AQ96PX6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CCDC85AQ96PX6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
CCDC85AQ96PX6 AC060814.1-201ENST00000554326 538 ntBASIC31.65■■■□□ 2.66
CCDC85AQ96PX6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC85AQ96PX6 AL139393.2-201ENST00000608721 2025 ntBASIC31.64■■■□□ 2.66
CCDC85AQ96PX6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.64■■■□□ 2.65
CCDC85AQ96PX6 AP004833.2-201ENST00000532228 1454 ntBASIC31.62■■■□□ 2.65
CCDC85AQ96PX6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC31.62■■■□□ 2.65
CCDC85AQ96PX6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
CCDC85AQ96PX6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC85AQ96PX6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC85AQ96PX6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
CCDC85AQ96PX6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC85AQ96PX6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.61■■■□□ 2.65
CCDC85AQ96PX6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.61■■■□□ 2.65
CCDC85AQ96PX6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.61■■■□□ 2.65
CCDC85AQ96PX6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC85AQ96PX6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC85AQ96PX6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC85AQ96PX6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
CCDC85AQ96PX6 ABCB10P3-201ENST00000561950 2166 ntBASIC31.59■■■□□ 2.65
CCDC85AQ96PX6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.58■■■□□ 2.65
CCDC85AQ96PX6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC31.58■■■□□ 2.65
CCDC85AQ96PX6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC85AQ96PX6 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.57■■■□□ 2.64
CCDC85AQ96PX6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC85AQ96PX6 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.57■■■□□ 2.64
CCDC85AQ96PX6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC85AQ96PX6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.56■■■□□ 2.64
CCDC85AQ96PX6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC85AQ96PX6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.54■■■□□ 2.64
CCDC85AQ96PX6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC85AQ96PX6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms