Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
R3HDM4Q96D70 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
R3HDM4Q96D70 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
R3HDM4Q96D70 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
R3HDM4Q96D70 AL121749.1-202ENST00000609313 2153 ntBASIC20.82■□□□□ 0.92
R3HDM4Q96D70 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HDM4Q96D70 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
R3HDM4Q96D70 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HDM4Q96D70 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HDM4Q96D70 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
R3HDM4Q96D70 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
R3HDM4Q96D70 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
R3HDM4Q96D70 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
R3HDM4Q96D70 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.81■□□□□ 0.92
R3HDM4Q96D70 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.81■□□□□ 0.92
R3HDM4Q96D70 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.81■□□□□ 0.92
R3HDM4Q96D70 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
R3HDM4Q96D70 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
R3HDM4Q96D70 BX255925.1-201ENST00000566954 1854 ntBASIC20.81■□□□□ 0.92
R3HDM4Q96D70 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
R3HDM4Q96D70 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3HDM4Q96D70 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
R3HDM4Q96D70 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
R3HDM4Q96D70 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.78■□□□□ 0.92
R3HDM4Q96D70 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HDM4Q96D70 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.78■□□□□ 0.92
R3HDM4Q96D70 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HDM4Q96D70 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HDM4Q96D70 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
R3HDM4Q96D70 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HDM4Q96D70 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.78■□□□□ 0.92
R3HDM4Q96D70 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.78■□□□□ 0.92
R3HDM4Q96D70 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HDM4Q96D70 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HDM4Q96D70 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HDM4Q96D70 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
R3HDM4Q96D70 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
R3HDM4Q96D70 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
R3HDM4Q96D70 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
R3HDM4Q96D70 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
R3HDM4Q96D70 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
R3HDM4Q96D70 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.75■□□□□ 0.91
R3HDM4Q96D70 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
R3HDM4Q96D70 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
R3HDM4Q96D70 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
R3HDM4Q96D70 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
R3HDM4Q96D70 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.74■□□□□ 0.91
R3HDM4Q96D70 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
R3HDM4Q96D70 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.73■□□□□ 0.91
R3HDM4Q96D70 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
R3HDM4Q96D70 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.73■□□□□ 0.91
R3HDM4Q96D70 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HDM4Q96D70 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
R3HDM4Q96D70 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.72■□□□□ 0.91
R3HDM4Q96D70 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.72■□□□□ 0.91
R3HDM4Q96D70 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.72■□□□□ 0.91
R3HDM4Q96D70 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HDM4Q96D70 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
R3HDM4Q96D70 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
R3HDM4Q96D70 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
R3HDM4Q96D70 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
R3HDM4Q96D70 AC108673.1-201ENST00000510422 1159 ntBASIC20.71■□□□□ 0.91
R3HDM4Q96D70 AC021231.2-201ENST00000594613 730 ntBASIC20.71■□□□□ 0.91
R3HDM4Q96D70 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
R3HDM4Q96D70 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
R3HDM4Q96D70 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
R3HDM4Q96D70 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
R3HDM4Q96D70 AC100797.4-201ENST00000631653 1827 ntBASIC20.7■□□□□ 0.9
R3HDM4Q96D70 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
R3HDM4Q96D70 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
R3HDM4Q96D70 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.69■□□□□ 0.9
R3HDM4Q96D70 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
R3HDM4Q96D70 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
R3HDM4Q96D70 LINC01003-201ENST00000564834 1764 ntBASIC20.69■□□□□ 0.9
R3HDM4Q96D70 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.69■□□□□ 0.9
R3HDM4Q96D70 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
R3HDM4Q96D70 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
R3HDM4Q96D70 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3HDM4Q96D70 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.68■□□□□ 0.9
R3HDM4Q96D70 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.68■□□□□ 0.9
R3HDM4Q96D70 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
R3HDM4Q96D70 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
R3HDM4Q96D70 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HDM4Q96D70 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HDM4Q96D70 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HDM4Q96D70 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HDM4Q96D70 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
R3HDM4Q96D70 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
R3HDM4Q96D70 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3HDM4Q96D70 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
R3HDM4Q96D70 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
R3HDM4Q96D70 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
R3HDM4Q96D70 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.65■□□□□ 0.9
R3HDM4Q96D70 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3HDM4Q96D70 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.65■□□□□ 0.9
R3HDM4Q96D70 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
R3HDM4Q96D70 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
R3HDM4Q96D70 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
R3HDM4Q96D70 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
R3HDM4Q96D70 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms