Protein–RNA interactions for Protein: Q8NHU3

SGMS2, Phosphatidylcholine:ceramide cholinephosphotransferase 2, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2Q8NHU3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SGMS2Q8NHU3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.74■□□□□ 0.91
SGMS2Q8NHU3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SGMS2Q8NHU3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.73■□□□□ 0.91
SGMS2Q8NHU3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.73■□□□□ 0.91
SGMS2Q8NHU3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SGMS2Q8NHU3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SGMS2Q8NHU3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
SGMS2Q8NHU3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SGMS2Q8NHU3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SGMS2Q8NHU3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SGMS2Q8NHU3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SGMS2Q8NHU3 GPX1-201ENST00000419349 1106 ntBASIC20.72■□□□□ 0.91
SGMS2Q8NHU3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SGMS2Q8NHU3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SGMS2Q8NHU3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SGMS2Q8NHU3 AC012354.3-201ENST00000623734 483 ntBASIC20.71■□□□□ 0.91
SGMS2Q8NHU3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SGMS2Q8NHU3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SGMS2Q8NHU3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SGMS2Q8NHU3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SGMS2Q8NHU3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SGMS2Q8NHU3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SGMS2Q8NHU3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SGMS2Q8NHU3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
SGMS2Q8NHU3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.68■□□□□ 0.9
SGMS2Q8NHU3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.68■□□□□ 0.9
SGMS2Q8NHU3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SGMS2Q8NHU3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SGMS2Q8NHU3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SGMS2Q8NHU3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.66■□□□□ 0.9
SGMS2Q8NHU3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.66■□□□□ 0.9
SGMS2Q8NHU3 NTF6A-201ENST00000591175 560 ntBASIC20.66■□□□□ 0.9
SGMS2Q8NHU3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SGMS2Q8NHU3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SGMS2Q8NHU3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SGMS2Q8NHU3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SGMS2Q8NHU3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SGMS2Q8NHU3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.65■□□□□ 0.9
SGMS2Q8NHU3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SGMS2Q8NHU3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
SGMS2Q8NHU3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SGMS2Q8NHU3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.64■□□□□ 0.89
SGMS2Q8NHU3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SGMS2Q8NHU3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SGMS2Q8NHU3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SGMS2Q8NHU3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.63■□□□□ 0.89
SGMS2Q8NHU3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.63■□□□□ 0.89
SGMS2Q8NHU3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SGMS2Q8NHU3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SGMS2Q8NHU3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SGMS2Q8NHU3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SGMS2Q8NHU3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SGMS2Q8NHU3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SGMS2Q8NHU3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SGMS2Q8NHU3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.61■□□□□ 0.89
SGMS2Q8NHU3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SGMS2Q8NHU3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SGMS2Q8NHU3 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.61■□□□□ 0.89
SGMS2Q8NHU3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SGMS2Q8NHU3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.6■□□□□ 0.89
SGMS2Q8NHU3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.6■□□□□ 0.89
SGMS2Q8NHU3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGMS2Q8NHU3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.6■□□□□ 0.89
SGMS2Q8NHU3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGMS2Q8NHU3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SGMS2Q8NHU3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SGMS2Q8NHU3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.59■□□□□ 0.89
SGMS2Q8NHU3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SGMS2Q8NHU3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SGMS2Q8NHU3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.58■□□□□ 0.89
SGMS2Q8NHU3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SGMS2Q8NHU3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.58■□□□□ 0.89
SGMS2Q8NHU3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SGMS2Q8NHU3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
SGMS2Q8NHU3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.58■□□□□ 0.89
SGMS2Q8NHU3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.58■□□□□ 0.89
SGMS2Q8NHU3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.58■□□□□ 0.89
SGMS2Q8NHU3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
SGMS2Q8NHU3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SGMS2Q8NHU3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SGMS2Q8NHU3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SGMS2Q8NHU3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.57■□□□□ 0.88
SGMS2Q8NHU3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SGMS2Q8NHU3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SGMS2Q8NHU3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SGMS2Q8NHU3 AC135731.1-201ENST00000569415 2548 ntBASIC20.57■□□□□ 0.88
SGMS2Q8NHU3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SGMS2Q8NHU3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SGMS2Q8NHU3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SGMS2Q8NHU3 AC018358.1-201ENST00000631079 1402 ntBASIC20.56■□□□□ 0.88
SGMS2Q8NHU3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SGMS2Q8NHU3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SGMS2Q8NHU3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SGMS2Q8NHU3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SGMS2Q8NHU3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.55■□□□□ 0.88
SGMS2Q8NHU3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SGMS2Q8NHU3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SGMS2Q8NHU3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SGMS2Q8NHU3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms