Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.75■■■□□ 2.67
RTL9Q8NET4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RTL9Q8NET4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.74■■■□□ 2.67
RTL9Q8NET4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.74■■■□□ 2.67
RTL9Q8NET4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
RTL9Q8NET4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
RTL9Q8NET4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
RTL9Q8NET4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RTL9Q8NET4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.72■■■□□ 2.67
RTL9Q8NET4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.72■■■□□ 2.67
RTL9Q8NET4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
RTL9Q8NET4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.71■■■□□ 2.67
RTL9Q8NET4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
RTL9Q8NET4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
RTL9Q8NET4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.7■■■□□ 2.67
RTL9Q8NET4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
RTL9Q8NET4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
RTL9Q8NET4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
RTL9Q8NET4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.68■■■□□ 2.66
RTL9Q8NET4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.68■■■□□ 2.66
RTL9Q8NET4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
RTL9Q8NET4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.68■■■□□ 2.66
RTL9Q8NET4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RTL9Q8NET4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
RTL9Q8NET4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RTL9Q8NET4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
RTL9Q8NET4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
RTL9Q8NET4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.65■■■□□ 2.66
RTL9Q8NET4 AC022413.1-201ENST00000624602 984 ntBASIC31.65■■■□□ 2.66
RTL9Q8NET4 MIR219A2-201ENST00000608502 1504 ntBASIC31.65■■■□□ 2.66
RTL9Q8NET4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
RTL9Q8NET4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
RTL9Q8NET4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.63■■■□□ 2.65
RTL9Q8NET4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RTL9Q8NET4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RTL9Q8NET4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RTL9Q8NET4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
RTL9Q8NET4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC31.61■■■□□ 2.65
RTL9Q8NET4 AC060814.1-201ENST00000554326 538 ntBASIC31.61■■■□□ 2.65
RTL9Q8NET4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
RTL9Q8NET4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
RTL9Q8NET4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RTL9Q8NET4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
RTL9Q8NET4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.59■■■□□ 2.65
RTL9Q8NET4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.59■■■□□ 2.65
RTL9Q8NET4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RTL9Q8NET4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RTL9Q8NET4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RTL9Q8NET4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.58■■■□□ 2.65
RTL9Q8NET4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
RTL9Q8NET4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
RTL9Q8NET4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.56■■■□□ 2.64
RTL9Q8NET4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RTL9Q8NET4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RTL9Q8NET4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
RTL9Q8NET4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
RTL9Q8NET4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.55■■■□□ 2.64
RTL9Q8NET4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
RTL9Q8NET4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.54■■■□□ 2.64
RTL9Q8NET4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.54■■■□□ 2.64
RTL9Q8NET4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
RTL9Q8NET4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.53■■■□□ 2.64
RTL9Q8NET4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
RTL9Q8NET4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.51■■■□□ 2.63
RTL9Q8NET4 AC100797.4-201ENST00000631653 1827 ntBASIC31.51■■■□□ 2.63
RTL9Q8NET4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
RTL9Q8NET4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RTL9Q8NET4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.5■■■□□ 2.63
RTL9Q8NET4 AC092296.2-201ENST00000589470 999 ntBASIC31.5■■■□□ 2.63
RTL9Q8NET4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RTL9Q8NET4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
RTL9Q8NET4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RTL9Q8NET4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
RTL9Q8NET4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
RTL9Q8NET4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
RTL9Q8NET4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
RTL9Q8NET4 NTF6A-201ENST00000591175 560 ntBASIC31.49■■■□□ 2.63
RTL9Q8NET4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
RTL9Q8NET4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.49■■■□□ 2.63
RTL9Q8NET4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
RTL9Q8NET4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RTL9Q8NET4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.47■■■□□ 2.63
RTL9Q8NET4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
RTL9Q8NET4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
RTL9Q8NET4 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.45■■■□□ 2.63
RTL9Q8NET4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
RTL9Q8NET4 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.45■■■□□ 2.63
RTL9Q8NET4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
RTL9Q8NET4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RTL9Q8NET4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
RTL9Q8NET4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
RTL9Q8NET4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RTL9Q8NET4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
RTL9Q8NET4 AL139393.2-201ENST00000608721 2025 ntBASIC31.43■■■□□ 2.62
RTL9Q8NET4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RTL9Q8NET4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
RTL9Q8NET4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RTL9Q8NET4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC31.42■■■□□ 2.62
RTL9Q8NET4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
RTL9Q8NET4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC31.39■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms