Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PSD4Q8NDX1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.75■■□□□ 1.39
PSD4Q8NDX1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PSD4Q8NDX1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PSD4Q8NDX1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PSD4Q8NDX1 AC142086.6-201ENST00000621154 1765 ntBASIC23.75■■□□□ 1.39
PSD4Q8NDX1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PSD4Q8NDX1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PSD4Q8NDX1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PSD4Q8NDX1 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.73■■□□□ 1.39
PSD4Q8NDX1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PSD4Q8NDX1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PSD4Q8NDX1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PSD4Q8NDX1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.71■■□□□ 1.39
PSD4Q8NDX1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PSD4Q8NDX1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
PSD4Q8NDX1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PSD4Q8NDX1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
PSD4Q8NDX1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.7■■□□□ 1.38
PSD4Q8NDX1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PSD4Q8NDX1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PSD4Q8NDX1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
PSD4Q8NDX1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.69■■□□□ 1.38
PSD4Q8NDX1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PSD4Q8NDX1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PSD4Q8NDX1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.68■■□□□ 1.38
PSD4Q8NDX1 MIR4449-201ENST00000578365 66 ntBASIC23.68■■□□□ 1.38
PSD4Q8NDX1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PSD4Q8NDX1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
PSD4Q8NDX1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PSD4Q8NDX1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
PSD4Q8NDX1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PSD4Q8NDX1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
PSD4Q8NDX1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.67■■□□□ 1.38
PSD4Q8NDX1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PSD4Q8NDX1 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.66■■□□□ 1.38
PSD4Q8NDX1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.66■■□□□ 1.38
PSD4Q8NDX1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PSD4Q8NDX1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PSD4Q8NDX1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PSD4Q8NDX1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PSD4Q8NDX1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PSD4Q8NDX1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PSD4Q8NDX1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PSD4Q8NDX1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PSD4Q8NDX1 AC135983.2-203ENST00000454486 1613 ntBASIC23.64■■□□□ 1.38
PSD4Q8NDX1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
PSD4Q8NDX1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
PSD4Q8NDX1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PSD4Q8NDX1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
PSD4Q8NDX1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.63■■□□□ 1.37
PSD4Q8NDX1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PSD4Q8NDX1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
PSD4Q8NDX1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PSD4Q8NDX1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PSD4Q8NDX1 WHAMMP2-203ENST00000563942 1603 ntBASIC23.62■■□□□ 1.37
PSD4Q8NDX1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PSD4Q8NDX1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PSD4Q8NDX1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
PSD4Q8NDX1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PSD4Q8NDX1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PSD4Q8NDX1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PSD4Q8NDX1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PSD4Q8NDX1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.61■■□□□ 1.37
PSD4Q8NDX1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PSD4Q8NDX1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PSD4Q8NDX1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PSD4Q8NDX1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.59■■□□□ 1.37
PSD4Q8NDX1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.59■■□□□ 1.37
PSD4Q8NDX1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PSD4Q8NDX1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PSD4Q8NDX1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.58■■□□□ 1.37
PSD4Q8NDX1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PSD4Q8NDX1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.58■■□□□ 1.36
PSD4Q8NDX1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
PSD4Q8NDX1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
PSD4Q8NDX1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.57■■□□□ 1.36
PSD4Q8NDX1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PSD4Q8NDX1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PSD4Q8NDX1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PSD4Q8NDX1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PSD4Q8NDX1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PSD4Q8NDX1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PSD4Q8NDX1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PSD4Q8NDX1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.55■■□□□ 1.36
PSD4Q8NDX1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PSD4Q8NDX1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PSD4Q8NDX1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PSD4Q8NDX1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.54■■□□□ 1.36
PSD4Q8NDX1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.53■■□□□ 1.36
PSD4Q8NDX1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.53■■□□□ 1.36
PSD4Q8NDX1 AL139393.2-201ENST00000608721 2025 ntBASIC23.52■■□□□ 1.36
PSD4Q8NDX1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.52■■□□□ 1.36
PSD4Q8NDX1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PSD4Q8NDX1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.52■■□□□ 1.36
PSD4Q8NDX1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
PSD4Q8NDX1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PSD4Q8NDX1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.51■■□□□ 1.35
PSD4Q8NDX1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PSD4Q8NDX1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms