Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC110285.7-201ENST00000624417 1536 ntBASIC25.92■■□□□ 1.74
PCDH20Q8N6Y1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PCDH20Q8N6Y1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
PCDH20Q8N6Y1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PCDH20Q8N6Y1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDH20Q8N6Y1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.91■■□□□ 1.74
PCDH20Q8N6Y1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDH20Q8N6Y1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.9■■□□□ 1.74
PCDH20Q8N6Y1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.9■■□□□ 1.74
PCDH20Q8N6Y1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PCDH20Q8N6Y1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.89■■□□□ 1.74
PCDH20Q8N6Y1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDH20Q8N6Y1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDH20Q8N6Y1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDH20Q8N6Y1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDH20Q8N6Y1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.88■■□□□ 1.73
PCDH20Q8N6Y1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
PCDH20Q8N6Y1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDH20Q8N6Y1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDH20Q8N6Y1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 AC008813.1-201ENST00000536597 885 ntBASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDH20Q8N6Y1 AC100797.4-201ENST00000631653 1827 ntBASIC25.84■■□□□ 1.73
PCDH20Q8N6Y1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
PCDH20Q8N6Y1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDH20Q8N6Y1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.84■■□□□ 1.73
PCDH20Q8N6Y1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDH20Q8N6Y1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDH20Q8N6Y1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDH20Q8N6Y1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDH20Q8N6Y1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDH20Q8N6Y1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
PCDH20Q8N6Y1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
PCDH20Q8N6Y1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH20Q8N6Y1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH20Q8N6Y1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.82■■□□□ 1.72
PCDH20Q8N6Y1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDH20Q8N6Y1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.82■■□□□ 1.72
PCDH20Q8N6Y1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH20Q8N6Y1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH20Q8N6Y1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDH20Q8N6Y1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDH20Q8N6Y1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
PCDH20Q8N6Y1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
PCDH20Q8N6Y1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH20Q8N6Y1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.8■■□□□ 1.72
PCDH20Q8N6Y1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.8■■□□□ 1.72
PCDH20Q8N6Y1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH20Q8N6Y1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH20Q8N6Y1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.79■■□□□ 1.72
PCDH20Q8N6Y1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.79■■□□□ 1.72
PCDH20Q8N6Y1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDH20Q8N6Y1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.78■■□□□ 1.72
PCDH20Q8N6Y1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
PCDH20Q8N6Y1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDH20Q8N6Y1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.78■■□□□ 1.72
PCDH20Q8N6Y1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
PCDH20Q8N6Y1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
PCDH20Q8N6Y1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
PCDH20Q8N6Y1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDH20Q8N6Y1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDH20Q8N6Y1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH20Q8N6Y1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH20Q8N6Y1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH20Q8N6Y1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH20Q8N6Y1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDH20Q8N6Y1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH20Q8N6Y1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH20Q8N6Y1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH20Q8N6Y1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.72■■□□□ 1.71
PCDH20Q8N6Y1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDH20Q8N6Y1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDH20Q8N6Y1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDH20Q8N6Y1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.71■■□□□ 1.71
PCDH20Q8N6Y1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.71■■□□□ 1.71
PCDH20Q8N6Y1 AC148477.6-201ENST00000623746 465 ntBASIC25.7■■□□□ 1.7
PCDH20Q8N6Y1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDH20Q8N6Y1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDH20Q8N6Y1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.69■■□□□ 1.7
PCDH20Q8N6Y1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH20Q8N6Y1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH20Q8N6Y1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms