Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC110285.7-201ENST00000624417 1536 ntBASIC25.92■■□□□ 1.74
PCDH20Q8N6Y1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PCDH20Q8N6Y1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
PCDH20Q8N6Y1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PCDH20Q8N6Y1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDH20Q8N6Y1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.91■■□□□ 1.74
PCDH20Q8N6Y1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDH20Q8N6Y1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.9■■□□□ 1.74
PCDH20Q8N6Y1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.9■■□□□ 1.74
PCDH20Q8N6Y1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PCDH20Q8N6Y1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.89■■□□□ 1.74
PCDH20Q8N6Y1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDH20Q8N6Y1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDH20Q8N6Y1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDH20Q8N6Y1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDH20Q8N6Y1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.88■■□□□ 1.73
PCDH20Q8N6Y1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
PCDH20Q8N6Y1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDH20Q8N6Y1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDH20Q8N6Y1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 AC008813.1-201ENST00000536597 885 ntBASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDH20Q8N6Y1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDH20Q8N6Y1 AC100797.4-201ENST00000631653 1827 ntBASIC25.84■■□□□ 1.73
PCDH20Q8N6Y1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
PCDH20Q8N6Y1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDH20Q8N6Y1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.84■■□□□ 1.73
PCDH20Q8N6Y1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDH20Q8N6Y1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDH20Q8N6Y1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDH20Q8N6Y1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDH20Q8N6Y1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDH20Q8N6Y1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
PCDH20Q8N6Y1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
PCDH20Q8N6Y1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH20Q8N6Y1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH20Q8N6Y1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.82■■□□□ 1.72
PCDH20Q8N6Y1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDH20Q8N6Y1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.82■■□□□ 1.72
PCDH20Q8N6Y1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH20Q8N6Y1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH20Q8N6Y1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDH20Q8N6Y1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDH20Q8N6Y1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
PCDH20Q8N6Y1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
PCDH20Q8N6Y1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH20Q8N6Y1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.8■■□□□ 1.72
PCDH20Q8N6Y1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.8■■□□□ 1.72
PCDH20Q8N6Y1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH20Q8N6Y1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH20Q8N6Y1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.79■■□□□ 1.72
PCDH20Q8N6Y1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.79■■□□□ 1.72
PCDH20Q8N6Y1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDH20Q8N6Y1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.78■■□□□ 1.72
PCDH20Q8N6Y1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
PCDH20Q8N6Y1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDH20Q8N6Y1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.78■■□□□ 1.72
PCDH20Q8N6Y1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
PCDH20Q8N6Y1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
PCDH20Q8N6Y1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
PCDH20Q8N6Y1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDH20Q8N6Y1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH20Q8N6Y1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDH20Q8N6Y1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH20Q8N6Y1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH20Q8N6Y1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH20Q8N6Y1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH20Q8N6Y1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDH20Q8N6Y1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH20Q8N6Y1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH20Q8N6Y1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH20Q8N6Y1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.72■■□□□ 1.71
PCDH20Q8N6Y1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDH20Q8N6Y1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDH20Q8N6Y1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDH20Q8N6Y1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.71■■□□□ 1.71
PCDH20Q8N6Y1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.71■■□□□ 1.71
PCDH20Q8N6Y1 AC148477.6-201ENST00000623746 465 ntBASIC25.7■■□□□ 1.7
PCDH20Q8N6Y1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDH20Q8N6Y1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDH20Q8N6Y1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.69■■□□□ 1.7
PCDH20Q8N6Y1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH20Q8N6Y1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH20Q8N6Y1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms