Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PGBD3Q8N328 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.84■■□□□ 1.73
PGBD3Q8N328 NTF6A-201ENST00000591175 560 ntBASIC25.84■■□□□ 1.73
PGBD3Q8N328 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PGBD3Q8N328 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
PGBD3Q8N328 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
PGBD3Q8N328 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.83■■□□□ 1.72
PGBD3Q8N328 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PGBD3Q8N328 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.82■■□□□ 1.72
PGBD3Q8N328 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PGBD3Q8N328 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
PGBD3Q8N328 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PGBD3Q8N328 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PGBD3Q8N328 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PGBD3Q8N328 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PGBD3Q8N328 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.81■■□□□ 1.72
PGBD3Q8N328 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PGBD3Q8N328 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PGBD3Q8N328 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PGBD3Q8N328 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.79■■□□□ 1.72
PGBD3Q8N328 AC012354.3-201ENST00000623734 483 ntBASIC25.79■■□□□ 1.72
PGBD3Q8N328 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PGBD3Q8N328 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
PGBD3Q8N328 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
PGBD3Q8N328 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PGBD3Q8N328 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PGBD3Q8N328 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
PGBD3Q8N328 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.76■■□□□ 1.71
PGBD3Q8N328 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PGBD3Q8N328 AC148477.6-201ENST00000623746 465 ntBASIC25.76■■□□□ 1.71
PGBD3Q8N328 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.76■■□□□ 1.71
PGBD3Q8N328 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PGBD3Q8N328 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PGBD3Q8N328 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
PGBD3Q8N328 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.75■■□□□ 1.71
PGBD3Q8N328 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
PGBD3Q8N328 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.74■■□□□ 1.71
PGBD3Q8N328 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.74■■□□□ 1.71
PGBD3Q8N328 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PGBD3Q8N328 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PGBD3Q8N328 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
PGBD3Q8N328 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.72■■□□□ 1.71
PGBD3Q8N328 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.72■■□□□ 1.71
PGBD3Q8N328 AC060814.1-201ENST00000554326 538 ntBASIC25.72■■□□□ 1.71
PGBD3Q8N328 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PGBD3Q8N328 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
PGBD3Q8N328 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.71■■□□□ 1.71
PGBD3Q8N328 MIR219A2-201ENST00000608502 1504 ntBASIC25.71■■□□□ 1.71
PGBD3Q8N328 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.71■■□□□ 1.71
PGBD3Q8N328 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.71
PGBD3Q8N328 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PGBD3Q8N328 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PGBD3Q8N328 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.7■■□□□ 1.7
PGBD3Q8N328 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
PGBD3Q8N328 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PGBD3Q8N328 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PGBD3Q8N328 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.68■■□□□ 1.7
PGBD3Q8N328 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PGBD3Q8N328 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
PGBD3Q8N328 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PGBD3Q8N328 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PGBD3Q8N328 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PGBD3Q8N328 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PGBD3Q8N328 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.67■■□□□ 1.7
PGBD3Q8N328 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PGBD3Q8N328 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
PGBD3Q8N328 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.66■■□□□ 1.7
PGBD3Q8N328 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.66■■□□□ 1.7
PGBD3Q8N328 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PGBD3Q8N328 ABCB10P1-201ENST00000614297 2181 ntBASIC25.66■■□□□ 1.7
PGBD3Q8N328 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PGBD3Q8N328 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PGBD3Q8N328 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PGBD3Q8N328 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PGBD3Q8N328 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.65■■□□□ 1.7
PGBD3Q8N328 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PGBD3Q8N328 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PGBD3Q8N328 AL033527.3-201ENST00000566366 1196 ntBASIC25.65■■□□□ 1.7
PGBD3Q8N328 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PGBD3Q8N328 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PGBD3Q8N328 U85056.1-201ENST00000616429 682 ntBASIC25.64■■□□□ 1.7
PGBD3Q8N328 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PGBD3Q8N328 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.63■■□□□ 1.69
PGBD3Q8N328 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PGBD3Q8N328 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.63■■□□□ 1.69
PGBD3Q8N328 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PGBD3Q8N328 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PGBD3Q8N328 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PGBD3Q8N328 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PGBD3Q8N328 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
PGBD3Q8N328 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PGBD3Q8N328 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PGBD3Q8N328 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PGBD3Q8N328 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PGBD3Q8N328 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.61■■□□□ 1.69
PGBD3Q8N328 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.61■■□□□ 1.69
PGBD3Q8N328 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.61■■□□□ 1.69
PGBD3Q8N328 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PGBD3Q8N328 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PGBD3Q8N328 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms